Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02457 ATGAAGTTTATGAAGTTGGGTTCCAAGCCTGATTCCCTTGAAGCTCGTGGACACTCTACCAGATATGTATCATCTGAATTGGCCACTGATGTTACCATTAATGTTGGTGAAGTTAAGTTTTACCTTCATAAGTTTCCTCTATTGTCGAAGAGCAAGCGATTACAGAAGTTGATGTCGAAAGCTAGTGAAGAGGATTCTGATGATATTTACTTAGATGATTTCCCAGGAGGACCTAAGGCCTTTGAAATATGTGCAAAATTCTGTTATGAAATGACGGTTACTCTTAATGCTTACAATGTTGTAGCTGCTCGCTGTGCGGCCGAATATCTTGAGATGACTGAGGATATTGATTTGGGGAACTTAGTTTTTAAAATTGAAGTGTTCCTTAACTCAGGAATCTTCTGTTGCTGGAAGGATTCTATAATTGTCCTCCAAACTTGTAATTCTTTTCTGCCATGGTCTGAGGATCTGAAGATCATTGAGAGATGCATAGGTTCCATAACTTCTAAAATTGCTGTTGATCCGGCGAGGGTGTTCTGGTCCTACACTTATAACAGGAAATTAACAGAGAGAAAAAAACTTGTTGAGCACAAGATGATGTTTCTAGATCACATTGAATCTGTTCCTAAGGATTGTTTTTTACTGAAGCTTTTGAAATTCGCCATATTAGTTGGAGCAAATGAGTCAGCAAGAGAAGAACTGATGAAGAAAATTAGCCCGAAATTGCATGAAGCTTGTGTCAAGGATTTGCTGATTCCAGCAAAGTCTCCTCAGATAACAACTTATGATGTTGATTTGGTACAAGGCCTTTTGAATCAATACTTGATTCACGAACAGGGAAGATGCAATATGGAGGTTATTGAGGAGAAAGATAATGGAAAAGATCTTTATATTTCGAGTGATAAATCCATATTGAACATTGGAAAGTTGGTCGACGGTTACCTCGGAGAAATTGCCCATGAGCCTAATCTCGGTCTCTCTAGTTTCGTCGATCTGTCGCAATCAGTTCCTGATTGTGCTAGGCCAAGTCACGATGGTCTATACAGAGCTATTGACATTTATTTGAAGAAGCATCCGGATTTGACAAAAGCAGAAAGGAAGAAGCTATGTAGACTCATGGATGTGAAGAAACTGACGGCGAATGCTTCAATGCATGCTGCGCAGAATGACAGGCTTCCTCTTCGAGTGATAGTGCAGGTTCTGTTTTTTGAGCAGGTTAGAGCCACTGCCAGAATTCAAGCAATACATAACAATTCACATGATCCTTTGCGGCTTGGAGGAGGTGAGAAGAGAGGGATTAATAGATGCCAGTCCCTCAAGGTGCCGATGAAAGAGGAAGGCAAGCTGAGCAAGAAGAACAGCAAAAACAGCCGAAGCGGCATGCAGTTGCTGCGGTCTGGGTCAAGGAGAATCATTGATAAGTTATGGATTGTGGGAAAAGGACAGCAAGAGAATAATAGGAGCTCTGAGACTTCAGGGAGTTTAGAGAATAATAGCCCAACTATGTCATCTGCTTTGAGACACCAGAGGCATTCTATCTCTTAG 1545 0.4097 MKFMKLGSKPDSLEARGHSTRYVSSELATDVTINVGEVKFYLHKFPLLSKSKRLQKLMSKASEEDSDDIYLDDFPGGPKAFEICAKFCYEMTVTLNAYNVVAARCAAEYLEMTEDIDLGNLVFKIEVFLNSGIFCCWKDSIIVLQTCNSFLPWSEDLKIIERCIGSITSKIAVDPARVFWSYTYNRKLTERKKLVEHKMMFLDHIESVPKDCFLLKLLKFAILVGANESAREELMKKISPKLHEACVKDLLIPAKSPQITTYDVDLVQGLLNQYLIHEQGRCNMEVIEEKDNGKDLYISSDKSILNIGKLVDGYLGEIAHEPNLGLSSFVDLSQSVPDCARPSHDGLYRAIDIYLKKHPDLTKAERKKLCRLMDVKKLTANASMHAAQNDRLPLRVIVQVLFFEQVRATARIQAIHNNSHDPLRLGGGEKRGINRCQSLKVPMKEEGKLSKKNSKNSRSGMQLLRSGSRRIIDKLWIVGKGQQENNRSSETSGSLENNSPTMSSALRHQRHSIS 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02457 514 SUPERFAMILY POZ domain 18 115 IPR011333 -
Aip10g02457 514 PANTHER OS12G0117600 PROTEIN 213 508 IPR043454 -
Aip10g02457 514 SMART BTB_4 29 127 IPR000210 GO:0005515
Aip10g02457 514 Pfam NPH3 family 186 383 IPR027356 -
Aip10g02457 514 Gene3D Potassium Channel Kv1.1; Chain A 8 124 IPR011333 -
Aip10g02457 514 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY1 213 508 IPR029961 GO:0060918|GO:0099402
Aip10g02457 514 PANTHER OS12G0117600 PROTEIN 5 211 IPR043454 -
Aip10g02457 514 MobiDBLite consensus disorder prediction 444 464 - -
Aip10g02457 514 ProSiteProfiles NPH3 domain profile. 135 407 IPR027356 -
Aip10g02457 514 CDD BTB_POZ_NPY3-like 21 124 - -
Aip10g02457 514 MobiDBLite consensus disorder prediction 482 514 - -
Aip10g02457 514 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
Aip10g02457 514 Pfam BTB/POZ domain 25 116 IPR000210 GO:0005515
Aip10g02457 514 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY1 5 211 IPR029961 GO:0060918|GO:0099402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02457 Aip-Chr10 110374227 110377402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02457 213 406 EF-hand Containing Proteins AT3G44820 37.436 1.84e-34 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02457 - - aip:107620912 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03457 06 131673392 131679407 Aip10g02457 10 110374227 110377402 PCT