Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03457 ATGAAGTTTATGAAGTTGGGATCAAAGCCTGATGCCCTTAAAGCTGATGGAAAATCTGTCAGGTATGTGTCATCTGAATTGGCTACAGATATCACAATCACTGTAGGTGAAGTTAAGTTTTGCCTTCACAAGTTCCCTCTACTGTCCAAGAGCAATCGATTACAGAAGTTGGTATCGAAGGTTGATGAAGAGAATTCTGATGAAATATACTTGGATGACTTCCCTGGAGGACCGAAGGCCTTCGAAGTTTGCGCAAAATTCTGCTATGGAATGACAGTTACTCTAAATCCTTATAATGTAGTGGCTGCTCGTTGTGCTGCGGAGTTCCTTGAGATGACTGAAGATATCGATAAAGGAAACTTGATTTTCAAGATTGAGGTGTTTTTGAACTCTAGTATCTTTCGTAGCTGGAAAGATTCGATAATTGTTCTCCAAACAACAAAGGCTCTTCTTCCATGGTCTGAGGATCTGAAGATCATTGGGAGATGCATTGATTCCATTGCTTCAAAGACTTCAGTGGACCCAGGCAACATCACTTGGTCTTACACTTATAACCGGAAATTAACAGAACCGGATAATATTGTGGAGGAGACATCCCAAGAGAAAGTTAAGCATGTTCCAAGGGATTGGTGGGTTGAAGATATATGTGAATTGGACATTGATCTTTATAGAAGAGTGATGATTACAGTGAAATCAAAGGGAAGAATGGATGGTGTTGTGATTGGGGAGGCACTAAAAATCTATGCCATAAGATGGTTACCCGAGTCTGTAGATGAATTGGTGTCTGGTGCCCACGCCCAGAGGTACAAAACCTTGGTAGAAACCATTGTGTGTCTGCTGCCGAGTGATAATGGCGTTGGTTGTTCATGTAGCTTCTTGCTCAAGTTATTGAAAGTGGCAATACTAGTTGAAGCTGATGAGTCATCGAGAGAAGAGTTGATGAAGAGCATCAGCCTGAAATTACATGAAGCTTCTGTGAAAGACTTGTTGATTCCAGCAAGGTCTCCTCAAAGTACTATGTTTGATGTTGATTTAGTACAAGGTCTTTTGAATCGATACATGAGTGAAGAAAAGGACGGCCTTAATTTGGAAGCCAATGAGAAGAAAGATAAAGTAAATGATGAATCTCTTTTGAGGAGTATGTCCTTGTTGAATGTTGGCAAGTTGGTTGATGGTTATATCAGAGAAATTTCGCACGATCCGAATCTCAGCCTCGCTAGTTTTATTGCTTTGTTGCAGTCAATTCCAAAGTCTGCTAGGCCAAATCATGATGGTTTGTACAGAGCTATTGATATCTACTTGAAGGAGCACCCTGGTCTGACAAAAGCTGAAAAAAAGAACATATGTGGACTCATGGATGTCAAAAAATTAACCATTGATGCGTCGATGCACGCCGCTCAAAATGATCGTCTTCCTCTCCGAGTTATAGTGCAGGTTCTCTATTTTGAGCAGGTCAAAGCTTCTGCCATCCCTCAATCCATTAATAACGTTCCACACGGCCCTTCAAATGCTGACTCAAACGGAGACGACGAATGCAAACAAACTGAGGGTGAGAGCTGTCAATACCTTGACAACCAAGTATGTCACTTGAAAGAAGGAGAGTTGTGCAAGAATGGAAAGTTGAACAAGAAGAATAGCAAGAACAGCCGGAGTGGCACGCAGTTGTTGCCTTCTCGGTCGAGGAGGATCTTCGATAAGTTGTGGAATGTGGGAAAAGGGCAGGCAGAGAATAGGAGTTCAGAGACTTCAGGGAGTTCTAATAGCCCAGCTTCAATAGTTCCTGGGGACACCAAGTCTTCTGGTTCATCTTTAAGACATCGGAGGCATTCTATATCTTAG 1839 0.4198 MKFMKLGSKPDALKADGKSVRYVSSELATDITITVGEVKFCLHKFPLLSKSNRLQKLVSKVDEENSDEIYLDDFPGGPKAFEVCAKFCYGMTVTLNPYNVVAARCAAEFLEMTEDIDKGNLIFKIEVFLNSSIFRSWKDSIIVLQTTKALLPWSEDLKIIGRCIDSIASKTSVDPGNITWSYTYNRKLTEPDNIVEETSQEKVKHVPRDWWVEDICELDIDLYRRVMITVKSKGRMDGVVIGEALKIYAIRWLPESVDELVSGAHAQRYKTLVETIVCLLPSDNGVGCSCSFLLKLLKVAILVEADESSREELMKSISLKLHEASVKDLLIPARSPQSTMFDVDLVQGLLNRYMSEEKDGLNLEANEKKDKVNDESLLRSMSLLNVGKLVDGYIREISHDPNLSLASFIALLQSIPKSARPNHDGLYRAIDIYLKEHPGLTKAEKKNICGLMDVKKLTIDASMHAAQNDRLPLRVIVQVLYFEQVKASAIPQSINNVPHGPSNADSNGDDECKQTEGESCQYLDNQVCHLKEGELCKNGKLNKKNSKNSRSGTQLLPSRSRRIFDKLWNVGKGQAENRSSETSGSSNSPASIVPGDTKSSGSSLRHRRHSIS 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03457 612 Pfam NPH3 family 209 462 IPR027356 -
Aip06g03457 612 MobiDBLite consensus disorder prediction 539 558 - -
Aip06g03457 612 PANTHER OS12G0117600 PROTEIN 4 600 IPR043454 -
Aip06g03457 612 ProSiteProfiles NPH3 domain profile. 209 486 IPR027356 -
Aip06g03457 612 MobiDBLite consensus disorder prediction 573 600 - -
Aip06g03457 612 MobiDBLite consensus disorder prediction 570 612 - -
Aip06g03457 612 CDD BTB_POZ_NPY3-like 20 124 - -
Aip06g03457 612 Gene3D Potassium Channel Kv1.1; Chain A 13 119 IPR011333 -
Aip06g03457 612 Pfam BTB/POZ domain 25 117 IPR000210 GO:0005515
Aip06g03457 612 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
Aip06g03457 612 MobiDBLite consensus disorder prediction 493 515 - -
Aip06g03457 612 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY1 4 600 IPR029961 GO:0060918|GO:0099402
Aip06g03457 612 SMART BTB_4 29 127 IPR000210 GO:0005515
Aip06g03457 612 SUPERFAMILY POZ domain 21 115 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03457 Aip-Chr6 131673392 131679407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03457 22 527 EF-hand Containing Proteins AT3G44820 32.778 7.05e-93 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03457 - - gmx:100809437 949.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03457 06 131673392 131679407 Aip06g03457 06 131673392 131679407 ECH
Aip06g03457 06 131673392 131679407 Aip10g02457 10 110374227 110377402 PCT