Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02208 ATGGAGTGTATTGGTAGGACTTCCAATGGAGAGAGCAGCGTAGCTCGGTTCCCATTGTCACCATCGAGCTCTTTGGTCATTCAGAAAGGAGATATCACCAAATGGTCCATCGATGGTTCCTCCGATGCAATAGTAAATCCTGCAAATGAGAGAATGCTTGGCGGTGGTGGTGCAGATGGCGCGATACATATGGCTGCTGGTCCTGAACTTGTTCAAGCATGTTATAGTGTTCCAGAGGTGAGGCCTGGAATTCGGTGCCCAACTGGGGAGGCAAGGATCACACCTGGTTTTAGATTGCCTGCTTCTCATGTTGTTCATACGGTTGGACCAATCTACAATTCTAATAGTAATCCTGCTGCTTCTCTTTCAAGCGCTTATAGGAACAGTTTGAGGGTTGCTAAGGATAAAAACATTCAGTATATAGCATTCCCAGCTATATCATGTGGTGTCTTTGGATATCCTTATGATGAGGCTGCCACGGTAGCGATTTCTGTCGTCAGGGAGTTTCGAAATGAGTTTAAGGAGATCCACTTTGTTCTGTTCTTGCAAGATATTTATCAAGTCTGGATAGCTTCTCTACCAATTCGCAGGGCTTCACGCCGACACCAGCCTCCATTTAGTTTCATTCCTCGCTTTTTTCTCCCTTCTAGAAAAAAAGAGAAGATGGGTGAGGGAGAACAATTTCAGCTGGGAACTGTTGGTGCATTGTCACTATCTGTGGTGTCGTCGGTATCGATTGTGATTTGCAATAAGGCGCTTATGAGCACATTACATTTCATTTTTGCTACAACTTTGACAAGTTGGCATCTGCTTGTCACATTTTGTTCTCTTCATGTGGCGCTAAAAATGAGATTGTTTGAACACAAGCCTTTTGACCAGAAAGCTGTTATGGGCTTCGGAATTCTAAATGGAATCTCAATAGGACTTTTAAATTTGAGCCTTGGATTCAATTCTGTTGGTTTCTTTCAGATGACTAAGCTGGCAATCATTCCATGTACCATTCTTTTGGAGATCCTTTTTCTCGGGAAAAAATTCAGTAAAAGAATTCAATTTTCCCTTGCCATTCTCCTTCTTGGTGTTGGGATTGCAACAGTCACTGATTTGCAGCTCAACGTTTTGGGCTCTTTCTTGTCTCTTCTAGCAGTGGTTACAACATGCGTTGCTCAGATTATGACAAATACTATTCAGAAGAAGTTCAAGGTTTCTTCCACCCAACTTCTGTATCAATCATGTCCATACCAAGCAGCAACTCTGTTAGTCTCTGGTCCATTTTTGGATAAATTTTTGACCAACCAAAATGTTTTTGCTTTCAACTATACAACACAAGTGACGGTAAGGGTTGAAAATTCTTCTTCCACCCTTTTTTCTCATCCAACTTTTTTCTTTAATAATTTCTGTATGTTCTCTGTTGTTTCCTTCTTCATTGTAGGTCTTCATTGTTCTGTCATGCCTCATCTCCATCTCGGTCAATTTTAG 1476 0.416 MECIGRTSNGESSVARFPLSPSSSLVIQKGDITKWSIDGSSDAIVNPANERMLGGGGADGAIHMAAGPELVQACYSVPEVRPGIRCPTGEARITPGFRLPASHVVHTVGPIYNSNSNPAASLSSAYRNSLRVAKDKNIQYIAFPAISCGVFGYPYDEAATVAISVVREFRNEFKEIHFVLFLQDIYQVWIASLPIRRASRRHQPPFSFIPRFFLPSRKKEKMGEGEQFQLGTVGALSLSVVSSVSIVICNKALMSTLHFIFATTLTSWHLLVTFCSLHVALKMRLFEHKPFDQKAVMGFGILNGISIGLLNLSLGFNSVGFFQMTKLAIIPCTILLEILFLGKKFSKRIQFSLAILLLGVGIATVTDLQLNVLGSFLSLLAVVTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQAATLLVSGPFLDKFLTNQNVFAFNYTTQVTVRVENSSSTLFSHPTFFFNNFCMFSVVSFFIVGLHCSVMPHLHLGQF 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02208 491 Pfam Triose-phosphate Transporter family 242 469 IPR004853 -
Aip10g02208 491 PANTHER NUCLEOTIDE/SUGAR TRANSPORTER FAMILY PROTEIN 223 448 - -
Aip10g02208 491 Pfam Macro domain 45 162 IPR002589 -
Aip10g02208 491 ProSiteProfiles Macro domain profile. 12 197 IPR002589 -
Aip10g02208 491 SUPERFAMILY Macro domain-like 23 196 IPR043472 -
Aip10g02208 491 PANTHER SOLUTE CARRIER FAMILY 35 223 448 - -
Aip10g02208 491 SMART YBR022w_8 24 162 IPR002589 -
Aip10g02208 491 Gene3D Leucine Aminopeptidase, subunit E, domain 1 6 198 IPR043472 -
Aip10g02208 491 CDD Macro_OAADPr_deacetylase 25 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02208 Aip-Chr10 98828520 98842119 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02208 222 433 Organic Solute Cotransporters AT1G21870 25.339 7.07e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02208 K15285 - gmx:100786535 376.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03544 03 115612108 115614802 Aip10g02208 10 98828520 98842119 PCT