Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03544 ATGTCTACAGCAACCAAGGGTGATAGGAAGGCCACCCTTGACGCAGCATCATGGATGTTCAATGTGGTATCATCTGTGGGAATCATCATTGTGAATAAAGCTCTCATGGCTAACTATGGTTTCAGTTTTGCTACGACCTTAACTGGCCTCCATTTTATCACAACCACCTTGCTGACTTCCATTCTTAAGGGGATGGGATATATCCAGAGTACTCAACTTCCAATTTCTGATCTCATCAAGTTTGTGTTATTTGCTAATTTTTCCATTGTCGGAATGAATGTGAGTTTAATGTGGAACTCTGTTGGTTTCTATCAGATCGCTAAGTTGAGTATGATTCCAGTATCTTGTTTGCTGGAAGTTGTCTTTGACGATGTGCGATATTCAAGGGACACAAAGCTAAGCATTTGTTTGGTACTCCTTGGTGTTGGTGTCTGTACTGTCACTGATGTGAGCGTCAATATGAAGGGCTTAATAGCTGCTGTGGTGGCAGTCTGGAGCACCGCACTTCAGCAGTATTATGTGCATTTTCTACAGAGGAAGTACTCTCTTGGATCGTTTAATTTGTTGGGCCATACTGCACCGGCACAGGCCGCAAGTTTACTGTTAGCAGGTCCCTTTGTGGACTATTGGTTGACAAACAAACGAGTTGATGCTTTCAACTATGGTCTGGCGTCTACTCTGTTCATCGTTCTGTCTTGCACTATCGCGGTAGGAGTAAACCTTAGTCAGTTCATCTGCATTGGCCGGTTTACTGCCGTAACATTCCAAGTCCTTGGCCATATGAAGACTATTCTAGTTCTTATCTTGGGATTTGTTTTCTTTGGAAAAGAAGGCCTCAATCTACATGTAGTTATAGGCATGCTCATTGCCATAGTTGGAATGATCTGTGCAGTTCCAGTATCATCTGAACCTGATGAAGAGGCATAG 927 0.4304 MSTATKGDRKATLDAASWMFNVVSSVGIIIVNKALMANYGFSFATTLTGLHFITTTLLTSILKGMGYIQSTQLPISDLIKFVLFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCLLEVVFDDVRYSRDTKLSICLVLLGVGVCTVTDVSVNMKGLIAAVVAVWSTALQQYYVHFLQRKYSLGSFNLLGHTAPAQAASLLLAGPFVDYWLTNKRVDAFNYGLASTLFIVLSCTIAVGVNLSQFICIGRFTAVTFQVLGHMKTILVLILGFVFFGKEGLNLHVVIGMLIAIVGMICAVPVSSEPDEEA 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03544 308 Pfam Triose-phosphate Transporter family 24 296 IPR004853 -
Aip03g03544 308 PANTHER NUCLEOTIDE/SUGAR TRANSPORTER FAMILY PROTEIN 7 304 - -
Aip03g03544 308 PANTHER SOLUTE CARRIER FAMILY 35 7 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03544 Aip-Chr3 115612108 115614802 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03544 18 293 Organic Solute Cotransporters AT1G77610 24.825 1.76e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03544 - - gmx:100800306 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03544 03 115612108 115614802 Aip03g03544 03 115612108 115614802 ECH
Aip03g03544 03 115612108 115614802 Aip10g02208 10 98828520 98842119 PCT