Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01862 ATGAGTTCGATTCCTTCGATCAACACACTCCCTGTTGTTGCTCCGCTTCGCTCCCTTTTCCCTCCTCAATGCGGCGAGTTTCTTCCTTTATCCGCCATCCCAAAACGGCGACGTTCATTGTCCTCGGCTGCGTTTCGCCCAGTTTCTTCGGGCCCTGGCCCAAGCCCAGGTCCAACTATCAATTCAGCTCCGCGCGGGAATGGAAGTTACACAGTTAGTGATTTCATGACAACGAAAGATCATTTGCACGTTGTCAAGCCCTCCACTACCGTTGACGAAGCTTTGGAGGCACTCGTCAACAACAGGATCAGTGGTCTTCCAGTGATCGATGACGACTGGAATCTCGTTGGAGTTGTTTCAGATTATGACTTGCTAGCAATTGATTCTATATCAGGTGGTTCTCAAAGTGATGCAAACTTGTTTCCTGATGTTGGTAGCTCTTGGAAAACATTTAATGAGATACAAAAACTGCTTAGTAAGACTAATGGAAAAGTTGTTGGTGACCTAATGACGCCAACTCCACTTGTTGTTCAAGAATCTACTAGTCTGGAGGATGCTGCTAGGCTGTTGCTTGAAACGAAATATCGTCGACTACCTGTGGTAGACAAGGATGGGAAGCTGGTTGGACTCATTACAAGGGGAAATATCGTTAAGGCGGCTCTGCTATCGAAACATGCCGGCGAGTGGTGA 690 0.4739 MSSIPSINTLPVVAPLRSLFPPQCGEFLPLSAIPKRRRSLSSAAFRPVSSGPGPSPGPTINSAPRGNGSYTVSDFMTTKDHLHVVKPSTTVDEALEALVNNRISGLPVIDDDWNLVGVVSDYDLLAIDSISGGSQSDANLFPDVGSSWKTFNEIQKLLSKTNGKVVGDLMTPTPLVVQESTSLEDAARLLLETKYRRLPVVDKDGKLVGLITRGNIVKAALLSKHAGEW 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01862 229 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX2, CHLOROPLASTIC 38 224 - -
Aip10g01862 229 ProSiteProfiles CBS domain profile. 170 227 IPR000644 -
Aip10g01862 229 SUPERFAMILY CBS-domain pair 66 219 IPR046342 -
Aip10g01862 229 MobiDBLite consensus disorder prediction 43 68 - -
Aip10g01862 229 CDD CBS_pair_plant_CBSX 78 219 - -
Aip10g01862 229 Gene3D - 67 226 IPR046342 -
Aip10g01862 229 ProSiteProfiles CBS domain profile. 76 136 IPR000644 -
Aip10g01862 229 SMART cbs_1 173 221 IPR000644 -
Aip10g01862 229 SMART cbs_1 81 129 IPR000644 -
Aip10g01862 229 Pfam CBS domain 166 219 IPR000644 -
Aip10g01862 229 Pfam CBS domain 72 126 IPR000644 -
Aip10g01862 229 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX1, CHLOROPLASTIC-LIKE 38 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01862 Aip-Chr10 52982693 52986218 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01862 - - gmx:100814621 327.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g01862 10 52982693 52986218 Aip10g01862 10 52982693 52986218 ECH
Aip10g01862 10 52982693 52986218 Aip05g00623 05 7631436 7634903 ECH