Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00623 ATGGACTCGGTGGCTTTTAGACTCGCTTCTCCTCCTTTTCCCTCACCCACGCGCCGCCTCCCTTCCAAACCTCACGCGCCACCTTCTTTCCCTTGTTTCCGCCGATTGCCGCTTCTTTTCCCACGGCTTCGCCACTTTCCCCCTCCCTCTGCTGCCAACAGCACCCTCACCGCCAATTCGCGAAGAGGTGGTTATTACACAGTTGGTGACTTCATGACAAAGAAAGAGGAGTTGCATGTGGTAAAGCCCACAACAACTGTGGATGAAGCTCTGGAAATTCTTGTTGAGAATAGGATAACTGGCTTTCCTGTCATTGATGATAATTGGAACTTAGTTGGTGTTGTTTCAGACTATGACTTGTTAGCACTGGACTCAATATCAGGTGGTGCAGGTCATGGGCGAAAAGATAACAGCATGTTTCCTGAAGTTGACAGCTCTTGGAAAACTTTCAATGAGGTTCAGAAACTGCTGAGTAAGACCAACGGCAAGGTCATCGGCGAATTAATGACCCCTGCACCCATGGTGGTTAGGGAAACAACTAATCTCGAGGATGCTGCTAGATTGTTGCTGGAAACGAAATTTCGACGGCTTCCGGTTGTAGATGCCGAGGGTAGGCTGGTGGGAATTATCACGAGAGGAAATGTTGTTAGAGCCGCACTTCACTTCAAAAAAGCTAACCAAAACAAAGCATGA 693 0.4834 MDSVAFRLASPPFPSPTRRLPSKPHAPPSFPCFRRLPLLFPRLRHFPPPSAANSTLTANSRRGGYYTVGDFMTKKEELHVVKPTTTVDEALEILVENRITGFPVIDDNWNLVGVVSDYDLLALDSISGGAGHGRKDNSMFPEVDSSWKTFNEVQKLLSKTNGKVIGELMTPAPMVVRETTNLEDAARLLLETKFRRLPVVDAEGRLVGIITRGNVVRAALHFKKANQNKA 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00623 230 Pfam CBS domain 165 220 IPR000644 -
Aip05g00623 230 Pfam CBS domain 68 122 IPR000644 -
Aip05g00623 230 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX1, CHLOROPLASTIC-LIKE ISOFORM X1 51 227 - -
Aip05g00623 230 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX2, CHLOROPLASTIC 51 227 - -
Aip05g00623 230 SUPERFAMILY CBS-domain pair 64 218 IPR046342 -
Aip05g00623 230 CDD CBS_pair_plant_CBSX 74 218 - -
Aip05g00623 230 ProSiteProfiles CBS domain profile. 72 131 IPR000644 -
Aip05g00623 230 Gene3D - 63 226 IPR046342 -
Aip05g00623 230 ProSiteProfiles CBS domain profile. 169 228 IPR000644 -
Aip05g00623 230 SMART cbs_1 77 125 IPR000644 -
Aip05g00623 230 SMART cbs_1 172 220 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00623 Aip-Chr5 7631436 7634903 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00623 - - gmx:100802500 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00623 05 7631436 7634903 Aip05g00623 05 7631436 7634903 ECH
Aip10g01862 10 52982693 52986218 Aip05g00623 05 7631436 7634903 ECH