Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01594 ATGGTTAAGAAAAAGGAGATGAAAAAGGAGATCTACAAGTACAAGGTGTTGAATTTCTTGACCAGAAAATTTGAATTGAAAAAGCAAGAACCATCTTTGGACATTAAGGAAGCATTTCACATGTTTGCAAAAGGTGGGGAATACATGTCAAATGATCAGCTTCTAGGGTTCATGTTGGAGCATCAAGGTGATAAGAACTGCACCTTAATGGATTTGGAGGTGGTTTTGTTGCAAATTGCTGGGAATTCCAACACTACAAGTAGGGAACAAGGGCTCAGCCTCATGGAGTTCATCAATTTTCTGCTTCTTGATGATTTCAATGGTCCATTGAAAACTGAGGTTCACCATGATATGAGTGCTCCCTTGTCACATTACTTTATGTACACTGGACACAATTCCTATCTGACTGGGAATCAACTCACAAGTGATTGCAGTGACAAGCCGATTATTGAGGCTTTGCAACAAGGAGTTCGAGTGATTGAACTCGATCTGTGGCCATCTTCAAATGAAGATGGTATTAAAGTAGTTCACGGAAGGACTCTTACCACTCCAGTTTTACTAACCAAATGTCTGGAATCCATAAAGAAATATGCTTTTGTCAAATCTGATTTTCCAGTGATACTAACTTTGGAAGACCACTTAACATCAAAACTTCAGGCCAAATTCACAGAAAAAGCAACTCAAATATTTGGAGACATGCTTTATTATCCCAAGACAGATTACTTGACAGAATTCCCTTCACCAGAATCATTGAAAAATCTAGTTGTTATATCCACCAAACCTCCTAAAGAATATGCTCATTCTAATAGTGTTATGGACAAGGGCAGCAATAATAACCATATGCAAAATGAAAGCGAACCGTCCTCCGGAGAAGAAGAAGAATTATGGAACGTGGAATTGCCAGATTCCATGGCTCAATTGACAACTGAGGAGAATAATGTAAGTGATGAAGACACAAATATATGTGATTTCAAACCAAACCAGCAAAATGCACCTGAATACAAACACTTGATTGCAATCCATGGTGGGAAATCAAAAGGTTCTGTGAAGGATCGACTGAAAGCCGATAGCGAAGTAGTTAAACGGCTAAGTTTGAGTGAGAAGAAACTCAAAAGTGCTTCTGAATCTCATGGAAAAGACATTATTAGGTTCACACAGAAAAATATACTGAGAGTCTATCCTAAAGGAGAACGCATCAAATCCACAAACTTTCGGCCGCATTTAGGGTGGATGTATGGAGCTCAAATGGTGGCATTCAATATGCAGGGGCATGGCAAATCGCTATGGCTGATGCAAGGAATGTTTAGAGCAAATGGAGGATGTGGTTATGTTAAAAAGCCCGAATTTCTGACCCGAAAAAATTCACATGAAGACGAGTTTGATCCTAGAAGAACATTGCCAGTGAAGCAGATATTAAGGGTAAATGTTTACCTAGGTGTTGGCTGGAGATCCGATTTCGGTGCAACACACTTTGATCTATTTTCTCCTCCAGATTTTTACACCAAGGTATGTCTTGTTGGGGTGCCAACTGATTGTGTAAAGAAAAGAACAAGGGTAATCAAGGACAATTGGCTTCCTGTTTGGGATGAAGAGTTTGAATTTCCTTTAACAGTTCCTGAGCTTGCTTTGCTGCGGATCGAAGTAAAGGATAAAGACAAGGGGAAGGATGATTTTGCAGGGCAGACTTGTTTACCAGTATCCGAACTACGACTCGGATTCCGGTCGGTCGCCCTGCATGACAGGAAGGGAAAGAAATTTAAATCTGTGAAGCTTCTAATGAGGTTTCAGCTTGAAATATTTTGA 1803 0.3982 MVKKKEMKKEIYKYKVLNFLTRKFELKKQEPSLDIKEAFHMFAKGGEYMSNDQLLGFMLEHQGDKNCTLMDLEVVLLQIAGNSNTTSREQGLSLMEFINFLLLDDFNGPLKTEVHHDMSAPLSHYFMYTGHNSYLTGNQLTSDCSDKPIIEALQQGVRVIELDLWPSSNEDGIKVVHGRTLTTPVLLTKCLESIKKYAFVKSDFPVILTLEDHLTSKLQAKFTEKATQIFGDMLYYPKTDYLTEFPSPESLKNLVVISTKPPKEYAHSNSVMDKGSNNNHMQNESEPSSGEEEELWNVELPDSMAQLTTEENNVSDEDTNICDFKPNQQNAPEYKHLIAIHGGKSKGSVKDRLKADSEVVKRLSLSEKKLKSASESHGKDIIRFTQKNILRVYPKGERIKSTNFRPHLGWMYGAQMVAFNMQGHGKSLWLMQGMFRANGGCGYVKKPEFLTRKNSHEDEFDPRRTLPVKQILRVNVYLGVGWRSDFGATHFDLFSPPDFYTKVCLVGVPTDCVKKRTRVIKDNWLPVWDEEFEFPLTVPELALLRIEVKDKDKGKDDFAGQTCLPVSELRLGFRSVALHDRKGKKFKSVKLLMRFQLEIF 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01594 600 CDD C2_PLC_like 469 598 - -
Aip10g01594 600 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 471 596 IPR035892 -
Aip10g01594 600 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 357 449 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Aip10g01594 600 Pfam C2 domain 472 570 IPR000008 -
Aip10g01594 600 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 364 450 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Aip10g01594 600 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 9 599 - -
Aip10g01594 600 Gene3D Phosphatidylinositol (PI) phosphodiesterase 113 462 IPR017946 GO:0006629|GO:0008081
Aip10g01594 600 PRINTS Phospholipase C signature 121 139 IPR001192 GO:0035556
Aip10g01594 600 PRINTS Phospholipase C signature 147 167 IPR001192 GO:0035556
Aip10g01594 600 PRINTS Phospholipase C signature 244 261 IPR001192 GO:0035556
Aip10g01594 600 PRINTS Phospholipase C signature 389 410 IPR001192 GO:0035556
Aip10g01594 600 PRINTS Phospholipase C signature 410 428 IPR001192 GO:0035556
Aip10g01594 600 PRINTS Phospholipase C signature 564 574 IPR001192 GO:0035556
Aip10g01594 600 ProSiteProfiles C2 domain profile. 452 580 IPR000008 -
Aip10g01594 600 MobiDBLite consensus disorder prediction 265 293 - -
Aip10g01594 600 Gene3D - 27 108 - -
Aip10g01594 600 Gene3D C2 domain 466 600 IPR035892 -
Aip10g01594 600 SUPERFAMILY EF-hand 31 118 IPR011992 -
Aip10g01594 600 SMART plcx_3 116 260 IPR000909 -
Aip10g01594 600 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 116 260 - -
Aip10g01594 600 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 9 599 IPR001192 GO:0035556
Aip10g01594 600 SMART C2_3c 471 578 IPR000008 -
Aip10g01594 600 SUPERFAMILY PLC-like phosphodiesterases 116 452 IPR017946 GO:0006629|GO:0008081
Aip10g01594 600 SMART plcy_3 334 451 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Aip10g01594 600 MobiDBLite consensus disorder prediction 270 285 - -
Aip10g01594 600 Pfam Phosphatidylinositol-specific phospholipase C, X domain 118 260 IPR000909 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01594 Aip-Chr10 32166768 32170800 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01594 12 598 Acyl Lipid Metabolism Gene Families AT2G40116 53.795 0.0 666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01594 K05857 - gmx:100803435 804.283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01493 07 26301479 26305897 Aip10g01594 10 32166768 32170800 ECH
Aip10g01594 10 32166768 32170800 Aip10g01594 10 32166768 32170800 ECH
Aip10g01594 10 32166768 32170800 Aip07g00854 07 9857822 9861971 PCT