Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01493 ATGGGGAGCTACCGCGTGTGCGTGTGCTTCCAGCGGCGATTCAAGGTGGCGGAGGCCGAGCCGCCGTCCGACGTCAAGGAGCTCTTTCAGAAATACTCCGACGGCGGGGCCCACATGACGCCGGACAACTTCCGCCGCTTCTTGGCCGAGGTTCAAGGTGATGACGTGTCCCTCATTGAGCACCAGAACGTGGTGGAGCAAGTTCTCCATAAGCGCCACCATATAACCAAGTTCGCAAGGCACAACCTCACACTCGATGATTTCCATTACTTCCTCTTCTCCACTGAGTTCAACCCTCCCATCGGATCTAAGGTTAATCAGGATATGTCGGCTCCATTGTCCCACTATTTTATATACACTGGCCACAACTCCTATCTCACTGGAAATCAACTAAGCAGCGATTGCAGTGATGTGCCCATTATAAAGGCCTTGAATCGGGGCGTTAGAGTGGTGGAACTTGATATATGGCCCAATTCCACAAAAGATGATGTGCTTGTTTTGCATGGAAGGACATTGACAACTCCTGTTGAGCTAATTAAATGTTTGAAATCAATTAAAGAACATGCTTTCGCTGCATCTCCATACCCAGTCATAATAACACTGGAAGACCATCTTACACCAGACCTTCAAGCTAAGGTTGCTCAGATGCTTACTAAAACATTTGGAGATATGTTGTTTTGTCCAAATCATGAAACTCTGAAAGAGTTTCCTTCCCCCGAAGAATTGAAGGGTCGGATCTTGATCTCAACAAAGCCTCCAAAGGAGTACGCTGAAACTGTCAAGGAGAATAATTCCTTTAAATCAGAAAAATCAAAGGATTCTGATGACGATGAATGGGGGAAGGAGGTCTCAACAAAAAATCAAAATGAAAATGATGTGGGTGATTCTGATCCAAATCAACACAGCGAAGATGATGCCGTCGATGATTTAGCTCCTGAGTTATGCTCATCTGAAGCTCCTAGTTATAAGCATCTCATCGCTATTCATGCTGGAAAACCGAAGGGTACTACTCTGAAGGACGCATTAAAAGTTGAAAATGATAAAGTTAGACGACTTAGCTTAAGTGAACAAGCTCTTGAAAAGGCTACTGAGTCACTTGGAACTGATCTTATTAGATTCACCCAGAAGAACTTTTTGAGGGTGTACCCCAAGGGTACAAGGTTCAATTCCTCTAACTACAAGCCAATGATTGGCTGGATGCATGGTGCTCAAATGGTTGCATTCAACATGCAGGGATATGGCAGAAATTTATGGTTGATGCATGGAATGTTTAGATCCAACGGAGGATGTGGTTATGTGAAAAAGCCAGAGTTTCTTATGAATGTAGGTCCAAATAATGAGGTATTCAATCCAAAAGATGATTTGCCAGTGAGAAAAACTCTAAAGGTGAAAGTATATCTCGGAGATGGATGGCGTATGGACTTTAAACAAACTCATTTCGACACTTATTCTCCGCCAGATTTTTATGCCAGGGTTGGTATAGCTGGGGCGCCGGCAGATCAGATAATGAAGAAAACAAAGATCATAGAAGATAATTGGATACCTACTTGGGAAGAAGAATTCACATTCCCTTTAAGAGTTCCAGAACTTGCATTGCTGAGAGTTGAAGTGCATGAATATGACATGTCTGAAACGGATGATTTTGCAGGCCAAACTTGCTTACCAGTTGCTGAACTAAAGCAAGGGATCCGTGCAGTTCCACTCTATGACCGCAAAGGGGAGAAGTATAACTCAGTTAGGCTTCTCATGCGATTTGAGTTCATCTAA 1767 0.4369 MGSYRVCVCFQRRFKVAEAEPPSDVKELFQKYSDGGAHMTPDNFRRFLAEVQGDDVSLIEHQNVVEQVLHKRHHITKFARHNLTLDDFHYFLFSTEFNPPIGSKVNQDMSAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALNRGVRVVELDIWPNSTKDDVLVLHGRTLTTPVELIKCLKSIKEHAFAASPYPVIITLEDHLTPDLQAKVAQMLTKTFGDMLFCPNHETLKEFPSPEELKGRILISTKPPKEYAETVKENNSFKSEKSKDSDDDEWGKEVSTKNQNENDVGDSDPNQHSEDDAVDDLAPELCSSEAPSYKHLIAIHAGKPKGTTLKDALKVENDKVRRLSLSEQALEKATESLGTDLIRFTQKNFLRVYPKGTRFNSSNYKPMIGWMHGAQMVAFNMQGYGRNLWLMHGMFRSNGGCGYVKKPEFLMNVGPNNEVFNPKDDLPVRKTLKVKVYLGDGWRMDFKQTHFDTYSPPDFYARVGIAGAPADQIMKKTKIIEDNWIPTWEEEFTFPLRVPELALLRVEVHEYDMSETDDFAGQTCLPVAELKQGIRAVPLYDRKGEKYNSVRLLMRFEFI 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01493 588 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 3 587 - -
Aip07g01493 588 SUPERFAMILY PLC-like phosphodiesterases 107 441 IPR017946 GO:0006629|GO:0008081
Aip07g01493 588 SMART plcy_3 322 440 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Aip07g01493 588 SMART C2_3c 460 568 IPR000008 -
Aip07g01493 588 Gene3D C2 domain 454 588 IPR035892 -
Aip07g01493 588 Gene3D Phosphatidylinositol (PI) phosphodiesterase 104 452 IPR017946 GO:0006629|GO:0008081
Aip07g01493 588 CDD C2_PLC_like 459 587 - -
Aip07g01493 588 CDD PI-PLCc_plant 107 427 - -
Aip07g01493 588 Pfam C2 domain 461 562 IPR000008 -
Aip07g01493 588 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 107 251 - -
Aip07g01493 588 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 350 438 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Aip07g01493 588 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 460 587 IPR035892 -
Aip07g01493 588 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 3 587 IPR001192 GO:0035556
Aip07g01493 588 MobiDBLite consensus disorder prediction 257 285 - -
Aip07g01493 588 Pfam Phosphatidylinositol-specific phospholipase C, X domain 109 251 IPR000909 -
Aip07g01493 588 Pfam Phosphoinositide-specific phospholipase C, efhand-like 23 96 IPR015359 -
Aip07g01493 588 SMART plcx_3 107 251 IPR000909 -
Aip07g01493 588 SUPERFAMILY EF-hand 8 109 IPR011992 -
Aip07g01493 588 ProSiteProfiles C2 domain profile. 441 570 IPR000008 -
Aip07g01493 588 MobiDBLite consensus disorder prediction 257 306 - -
Aip07g01493 588 PRINTS Phospholipase C signature 112 130 IPR001192 GO:0035556
Aip07g01493 588 PRINTS Phospholipase C signature 138 158 IPR001192 GO:0035556
Aip07g01493 588 PRINTS Phospholipase C signature 235 252 IPR001192 GO:0035556
Aip07g01493 588 PRINTS Phospholipase C signature 378 399 IPR001192 GO:0035556
Aip07g01493 588 PRINTS Phospholipase C signature 399 417 IPR001192 GO:0035556
Aip07g01493 588 PRINTS Phospholipase C signature 554 564 IPR001192 GO:0035556
Aip07g01493 588 Gene3D - 20 99 - -
Aip07g01493 588 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 353 439 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01493 Aip-Chr7 26301479 26305897 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01493 1 588 Acyl Lipid Metabolism Gene Families AT5G58700 64.370 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01493 K05857 - tcc:18590491 912.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01493 07 26301479 26305897 Aip07g01493 07 26301479 26305897 ECH
Aip07g01493 07 26301479 26305897 Aip10g01594 10 32166768 32170800 ECH