Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01158 ATGTCCTTCCTCTCTATCTGCCTTCTTATTTGTTTCTGTTTTCAGAGTGTATCATCTGAAAATGTATCCGGAAGTGACCTACAGCAAGCTAGCATCCCACCAAGAGGTTGGAATTCCTATGATTCTTTTTGTTGGACAGTTTCTGAACAGGAATTCTTACAAAATGCTGAAATAGTGTCTCGAACACTACATGATCATGGATATGAGTATGCTGTGGTGGATTACCTTTGGTATAGAAGGAAAGTCAATGGCGCTGGACATGATTCTCTTGGGTTTGATGTGATTGATGAATGGGGGAGAGTGATTCCTGACCCTGGAAGGTGGCCTTCTTCCCTAGGTGGAAAAGGGTTCATTGAAGTTGCTAATAAGGTACATAGCATGGGTTTGAAATTTGGGATTCATGTTATGAGAGGGATAAGCACACAAGCCGTCAATGCAAACACTGCTATCCTAGATACAGCAACGGGAGGTGCTTATCAAGAATCTGGTCGAGTTTGGGGTGCCAAAGACATAGCAATCCCAGCAAGGGCTTGTGCATGGATGCCTCATGGTTTCATGAGTGTAAATACATCATTGGGAGCTGGGAAAGCTTTTTTGAGATCCCTTTATGAGCAATATGCTTCATGGGGTGTTGATTTTGTGAAACATGACTGTGTATTTGGTGATGACTTGGATTTAAGTGAAATAAGCTATGTATCAGAGGTTCTAAGGAAGCTTGATCGCTCCATTGTATATTCCTTGTCTCCTGGAACTAGTGTGACCCCAGCCATGGCCAAGGATGTCATTGGACTGGTCAACATGTATCGTATTACAGGAGATGACTGGGATACATGGTGGGATGTAAAATGTCACTTCAACGTAACAAGGGATTTTGCAACTGCTAATCTGATAGGAGCAACAGGCTTAAATGGGAAATCCTGGCCTGATTTGGACATGCTTCCATTTGGATGGTTAACAGATCCTGGTGTAAATGAAGGTCCACACAGGTATTGTAGACTCAATCTAGAAGAGCAAAAGACACAGATAACACTTTGGGCGATAGCAAAGTCTCCCCTAATGTATGGAGGGGATCTGCGAAAAATTGATCCTACAACATATGGCCTTATCACAAACCCTACTCTTCTGGAGATCAACTCTTTTAGCTCAAACAATATGGAGGCATGTGAGCCTTCTGATTACCCATTATTTCCTTATATCACAAGCTTGAGGAGTGAAGGTCAAGATCTTGGAGGGCAAATGAGAAGATATATCAAAGAAACAAAGACCTTATATACACATTCATTAGGTCTCACTAACTGCTCTGATCCGAAGGCAAGTGCTTGGACTAGTGAAACTGTTGACCAAGATGTTGAAAGGATCTGTTGGAAAGGGACTTTGAGAAACAAGCCTTTGGCAGCTTTCTGTGTAAACAAGAGAAAACTTCACTTCAAATTTATTGAAGAGAGTTTGTCCCAACTGAACCTTGGAAGGAAATATCATTTAGTTGCAACCAATAGAATAAAATTTTGCTTGGATGCTTCTCCTAGACGAAAGCTTACTTCTAACGAGTTCGTTAGACGCCCATTTTCTCCGTGCAAATGGGATGCATATCAGATGTGGGAACTGAACCCTAATGGGACGCTGGAAAATAGTTATTCTGGCCTATGTGCAACAATGGAGCCTGTCAAAGCTACTATTAACTCCGGTGGGCTTCGCTCTTGGATTGCAACCGGAAGAAATGGAGAAGTCTATGTTGCTTTCTTCAATCTAAATGAGCAGAAGACTGTGATATCTGCCCAGATATCAGACATTGCTAAAGTTCTTCCAGGCACAGACTTAAGTTCTTGTGAGGGCACTGAATTGTGGAGTGGAAGTGACGTGGTAATATCACAGGGTGCGTTATCAACGGCGGTTGAAGCGCATGGAAATGCGCTATTTGTACTAAGCTGCAGTCCCAAGAACAAAATAAAAATGGTTGTCACTGCTGATGCATAA 1974 0.4225 MSFLSICLLICFCFQSVSSENVSGSDLQQASIPPRGWNSYDSFCWTVSEQEFLQNAEIVSRTLHDHGYEYAVVDYLWYRRKVNGAGHDSLGFDVIDEWGRVIPDPGRWPSSLGGKGFIEVANKVHSMGLKFGIHVMRGISTQAVNANTAILDTATGGAYQESGRVWGAKDIAIPARACAWMPHGFMSVNTSLGAGKAFLRSLYEQYASWGVDFVKHDCVFGDDLDLSEISYVSEVLRKLDRSIVYSLSPGTSVTPAMAKDVIGLVNMYRITGDDWDTWWDVKCHFNVTRDFATANLIGATGLNGKSWPDLDMLPFGWLTDPGVNEGPHRYCRLNLEEQKTQITLWAIAKSPLMYGGDLRKIDPTTYGLITNPTLLEINSFSSNNMEACEPSDYPLFPYITSLRSEGQDLGGQMRRYIKETKTLYTHSLGLTNCSDPKASAWTSETVDQDVERICWKGTLRNKPLAAFCVNKRKLHFKFIEESLSQLNLGRKYHLVATNRIKFCLDASPRRKLTSNEFVRRPFSPCKWDAYQMWELNPNGTLENSYSGLCATMEPVKATINSGGLRSWIATGRNGEVYVAFFNLNEQKTVISAQISDIAKVLPGTDLSSCEGTELWSGSDVVISQGALSTAVEAHGNALFVLSCSPKNKIKMVVTADA 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01158 657 Pfam Alpha galactosidase C-terminal beta sandwich domain 562 641 IPR041233 -
Aip10g01158 657 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 3 641 IPR002241 GO:0004553|GO:0005975
Aip10g01158 657 PRINTS Glycosyl hydrolase family 27 signature 27 46 IPR002241 GO:0004553|GO:0005975
Aip10g01158 657 PRINTS Glycosyl hydrolase family 27 signature 121 142 IPR002241 GO:0004553|GO:0005975
Aip10g01158 657 PRINTS Glycosyl hydrolase family 27 signature 336 357 IPR002241 GO:0004553|GO:0005975
Aip10g01158 657 SUPERFAMILY Ricin B-like lectins 501 564 IPR035992 -
Aip10g01158 657 SUPERFAMILY (Trans)glycosidases 31 378 IPR017853 -
Aip10g01158 657 CDD GH27 33 378 IPR002241 GO:0004553|GO:0005975
Aip10g01158 657 SUPERFAMILY Glycosyl hydrolase domain 558 642 - -
Aip10g01158 657 PANTHER ALPHA-GALACTOSIDASE 3 641 - -
Aip10g01158 657 Gene3D Aldolase class I 10 380 IPR013785 -
Aip10g01158 657 Gene3D - 556 644 IPR013780 -
Aip10g01158 657 Pfam Alpha galactosidase A 203 378 IPR002241 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01158 Aip-Chr10 16586999 16592281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01158 5 473 Glycoside Hydrolase AT3G26380 64.468 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01158 - - gmx:100777954 1023.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04517 03 129450246 129456053 Aip10g01158 10 16586999 16592281 PCT