Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01097 ATGGAAATGATGCCATACCAGCTTTCCAGGTTACCTTACCATGATTCTCTCAAACTTCTGGAGGCTGATATACAACATGCCAATTCTTTGGCTGCAGCAATTCCAAGAACAGAAGGTGGAACTGTTCTTCAAATGAAATTGGTTTATAATCACTTGGCTCCTTTAGTTCTCTTGTTTCTACAGTGGATGGATTGTTCCTGTGCTAGCTTTCTACACAGATATCTCAATCTCTTCCACATAGTTATATACAAGGTACACAATGATGGTAGAAACATGTCTAGTCATGGAAGGAAAGCTACCATAGGGGACTTTTATGCTGTTATATTGCCATCTCTCCAGCGGCTTCATGGTAGCTTGGAGAAGTTGGAGACTTCGAAAGAAGGCCAATCATCGAGCATGGAACATTCAAGTTATGGCAAGAAGATGATTGTTGAAGGTGATGGGAAACTAACCAATGTTGACTTGCAAAGAGAGGATGAATGTGATATTTGCTTAGAGCCTTGCACCAAAATGGTCCTGCCTAATTGTTGCCATGCCATGTGTATCCGATGCTACCGCAAGTGGAACACTCGGTCGCAGTCTTGCCCTTTTTGCCGCGGTAGCTTGAGGAGGGTTAACTCTGAGGATCTTTGGGTGCTAACTTGCAATGAAGATGTTGTTGATGCTGAAACAGTTTCTAAGGAAGACTTGTGGCGTTTCTACCTTTATATCAATAAGCTACCAAAACATCACCCAGAAGCACTTTTTGTAATGTACTATGAGTATCTCATTTGA 774 0.4186 MEMMPYQLSRLPYHDSLKLLEADIQHANSLAAAIPRTEGGTVLQMKLVYNHLAPLVLLFLQWMDCSCASFLHRYLNLFHIVIYKVHNDGRNMSSHGRKATIGDFYAVILPSLQRLHGSLEKLETSKEGQSSSMEHSSYGKKMIVEGDGKLTNVDLQREDECDICLEPCTKMVLPNCCHAMCIRCYRKWNTRSQSCPFCRGSLRRVNSEDLWVLTCNEDVVDAETVSKEDLWRFYLYINKLPKHHPEALFVMYYEYLI 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01097 257 SUPERFAMILY RING/U-box 152 203 - -
Aip10g01097 257 Pfam Ring finger domain 159 199 IPR001841 -
Aip10g01097 257 PANTHER RING FINGER PROTEIN 41, 151 6 257 - -
Aip10g01097 257 SMART ring_2 161 198 IPR001841 -
Aip10g01097 257 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 131 210 IPR013083 -
Aip10g01097 257 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 6 257 - -
Aip10g01097 257 ProSiteProfiles Zinc finger RING-type profile. 161 199 IPR001841 -
Aip10g01097 257 ProSitePatterns Zinc finger RING-type signature. 176 185 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01097 Aip-Chr10 15068443 15070756 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01097 - - gmx:100790422 444.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g01097 10 15068443 15070756 Aip10g01097 10 15068443 15070756 ECH
Aip10g01097 10 15068443 15070756 Aip03g04922 03 133812519 133814814 PCT