Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04922 ATGGAAGTGGTGCCGTACCAGCTTTCTCGGTTGCCTTACCAGGATTCCCTCAAACTGCTTGAGGCTGATATACAGCACGCCAATGCTTTGGCTGCTGCAATTCCAAGAGCCAAAGGTGGGACTCTTCTCCAAATGAAATTGGTTTACAATCACTTGGCTCCTCTCCTTCTGTTGTTCTTGCAATGGATGGATTGTTCTTGCACATGCTTTCTACACAGTTATCTCAACTTGTTCCACATACTTGTGTACAAAGTTCATAATGATGGTAGATCAAGCATAACTTCTCATGCAAGGAAGGCAACCATAAGAGACTTTTATGCCGTTATTCTGCCGTCTCTCCAGCGGCTCCATGGAAGCTTGGATAAGTTGGAGATTTGTAAGGAAGGACACTCTTGCAACAATGGCAACAAGATTATTGAAGGTGATAGGAAACTGATCAATGTTGATTTGGAAAGAGAAGATGAATGTGGAATTTGCTTAGAGCCATGCACCAAAATGGTTTTGCCTAATTGCTGTCATGCCATGTGTATCAAATGCTACCGCAAGTGGAACACGCGGTCCGAGTCATGCCCGTTTTGCCGCGGCAGCTTGAGGAGAGTTAACTCTGAGGATCTATGGGTTCTGACCTGCAATGAGGATGTTGTTGATGCTGAAACTGTTTCAAAAGAGGACTTGCTGCGCTTCCATCTTTATATCAATAGCCTACCTAAAGATTACCCTGATGCACTATTTTTAATGTATTATGAATACTTAATTTGA 759 0.4308 MEVVPYQLSRLPYQDSLKLLEADIQHANALAAAIPRAKGGTLLQMKLVYNHLAPLLLLFLQWMDCSCTCFLHSYLNLFHILVYKVHNDGRSSITSHARKATIRDFYAVILPSLQRLHGSLDKLEICKEGHSCNNGNKIIEGDRKLINVDLEREDECGICLEPCTKMVLPNCCHAMCIKCYRKWNTRSESCPFCRGSLRRVNSEDLWVLTCNEDVVDAETVSKEDLLRFHLYINSLPKDYPDALFLMYYEYLI 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04922 252 ProSitePatterns Zinc finger RING-type signature. 171 180 IPR017907 -
Aip03g04922 252 ProSiteProfiles Zinc finger RING-type profile. 156 194 IPR001841 -
Aip03g04922 252 PANTHER RING FINGER PROTEIN 41, 151 6 252 - -
Aip03g04922 252 Pfam Ring finger domain 154 194 IPR001841 -
Aip03g04922 252 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 6 252 - -
Aip03g04922 252 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 140 205 IPR013083 -
Aip03g04922 252 SUPERFAMILY RING/U-box 146 198 - -
Aip03g04922 252 SMART ring_2 156 193 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04922 Aip-Chr3 133812519 133814814 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04922 - - gmx:100790422 469.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g01097 10 15068443 15070756 Aip03g04922 03 133812519 133814814 PCT