Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01055 ATGGGTTCTGAGAAGGAAATAAGTGGTGGCGGTTTGGCATCTGCAGCTATAACAACAACAACAACAACAGGTTCAAAGCAAAAGAACCTTGATGATTGGCTTCCCATAACTGCTTCAAGAAATGCGAAATGGTGGTATTCTGCTTTTCACAACCTCACGGCCATGGTTGGTGCTGGAATTCTCAGCCTTCCTTATGCCATGTCACATATGGGATGGGGTGCTGGTGTTACAGTGATGATCCTGTCATGGATAATCACACTATACACGCTATGGCAAATGGTTGAGATGCACGAAATGGTACCTGGGGGAAAGAGAAACGACAGGTATCATCAGTTGGGACAAGAAGCTTTCGGAGAAAAGCTTGGTCTGTGGATTGTGGTTCCTCAACAACTGCTTGTTGAAGTTGGTACATGCATTGTATACATGGTCACTGGAGGCAAATCTTTGAAAAAAGTTCATGAAACCTTTTGTCCTGATTGTAAACAAATCAGAACCACTTATTGGATCATGGTGTTTGCTTCTGTAAACTTTGTGCTTGCACAAATTCCTAACTTTAACTCTATTTCCGCTATCTCTGCTGGTGCAGCCGTCATGTCTCTCAGTTACTCAACAATCGCTTGGGCTGCGTCTATCAAGAAAGGGATTTCAAAGGACATAGACTATACTGTAAAAATGAATAGCACGAGCGATGGTGTGTTCAATTTCTTCTCTGCATTGGGAGATGTGGCATTTGCATACGCAGGCCACAATGTGGTTCTTGAAATCCAAGCTACAATGCCTTCAACTGCGGAGAAACCTTCTAAGATACCAATGTGGAGAGGGTGTGTTTTGGCATACATTGGAGTTGCATTATGCTACTTCCCTGTTGCCTTTATTGGGTACTACATGTTTGGAAATTCTGTGGATGATAACATCCTCATCACACTCCAACGCCCTGCTTGGCTTATTGGCATTGCTAACTTGTTTGTTGTCATCCATGTTGTTGGAGGCTACCAGGTATTTGCAATGCCAGTGTTTGATATGATTGAAACCTTCTTGGTTACACGCTTGAATTTCTCACCTTCTACTACCCTGCGATTCACAACTCGCTTTCTATATGTTGCAATTACAATGTTCATAGGAATTTGTGTCCCATTTTTTGGCTACCATGCATCATATGGCTTAAGCTCAAGAAACCTAAAAAATATGGCTTGTCTTGGACGATTAATTGGATATGTATTATTATTGGAATATTGA 1236 0.4183 MGSEKEISGGGLASAAITTTTTTGSKQKNLDDWLPITASRNAKWWYSAFHNLTAMVGAGILSLPYAMSHMGWGAGVTVMILSWIITLYTLWQMVEMHEMVPGGKRNDRYHQLGQEAFGEKLGLWIVVPQQLLVEVGTCIVYMVTGGKSLKKVHETFCPDCKQIRTTYWIMVFASVNFVLAQIPNFNSISAISAGAAVMSLSYSTIAWAASIKKGISKDIDYTVKMNSTSDGVFNFFSALGDVAFAYAGHNVVLEIQATMPSTAEKPSKIPMWRGCVLAYIGVALCYFPVAFIGYYMFGNSVDDNILITLQRPAWLIGIANLFVVIHVVGGYQVFAMPVFDMIETFLVTRLNFSPSTTLRFTTRFLYVAITMFIGICVPFFGYHASYGLSSRNLKNMACLGRLIGYVLLLEY 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01055 411 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 21 383 - -
Aip10g01055 411 Gene3D Amino acid/polyamine transporter I 37 409 - -
Aip10g01055 411 Pfam Transmembrane amino acid transporter protein 41 381 IPR013057 -
Aip10g01055 411 PANTHER OS05G0424000 PROTEIN-RELATED 21 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01055 Aip-Chr10 13941321 13943934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01055 12 378 Organic Solute Cotransporters AT1G24400 72.752 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01055 - - adu:107468917 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g01055 10 13941321 13943934 Aip10g01055 10 13941321 13943934 ECH
Aip10g01055 10 13941321 13943934 Aip03g04938 03 133994882 134002262 PCT