Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04938 ATGACTGACGATTCAAGAAAGTCTGCCATTGATAATTGGCTTCCTGTCACTGCTTCTAGAAATGCCAAATGGTGGTATTCTGCTTTTCACAATCTCACCGCCATGGTTGGTGCTGGTGTCCTCAGTCTTCCTTATGCCATGTCAAAGATGGGCTGGGGTCCTGGCGTGGTTGCACTGCTATTGTCATGGATCATCACCTTGTTCACACTATGGCAAATGGTTGAGATGCACGAAATGGTTCCCGGCAAGAGATTTGACCGGTACCACGAGTTAGGGCAGTATGCCTTTGGTGAAAAGCTTGGCCTATACATCGTGGTTCCCCAACAGCTACTTGTTGAGGTTGGCACATGCATTGTTTATATGGTCACCGGAGGCAAATCTCTTAAGAAGTTTCATGGCAGCGTTTGTCCCACATGCAAAGACATCAGAACCTCCTATTGGATTATGATCTTTGCATCTGTCAACTTTGTACTCTGTCAATGCCCCAGCTTCAACTCTATTTCTGCTGTCTCTCTAGCTGCAGCCATCATGTCTATTGCCTACTCAACTATTGCTTGGGTGGCTTCACTTATGAAGGGAGTTCAACCAAATGTGGATTATGGCTACAACGCAAAGAGCACAGCAGATGGTGTGTTCAACTTCATGACTGCCTTGGGAGATGTAGCATTCGCCTATGCAGGCCACAATGTAGTTCTGGAAATCCAAGCAACGATGCCTTCAACCGAAGAAGTGCCTTCCAAGAAACCAATGTGGAACGGAGTTATCCTTGCATACATAGGAGTGGCAATCTGCTACTTCCCTGTTGCCTTCATTGGATACTATGTATTTGGAAACTCGGTTGAAGATAACATCCTCATCACTCTTGAGCACCCTATTTGGCTCATTGCTGCTGCTAACATGTTTGTTATTGTCCATGTTGTTGGTGGCTACCAGGTATTTTCTATGCCAGTGTTTGATATGATGGAAACCTTATTAGTGAAGCAGTTTAAGTTCCCCCCTTGCTTCACACTTCGATTCGTTGCCCGCACTCTATTTGTAGCATTCACAATGGCAATTGCTATATGCGTCCCATTCTTTGGTTCACTTCTTGGATTTCTTGGAGGATTTGCCTTTGCCCCAACATCATACTTCCTGCCTTGCATAATATGGCTTAAAGTTTACAAACCTAAGAGATTTAGCTTGTCTTGGTTCGTAAATTGGACATGCATTGTGATTGGGGTACTTTTGATGACAGTATCCCCAATTGGAGCACTGAGAAACATCATCATTTCAATCCATAACTACAAGTTCTTCTCCTGA 1299 0.4434 MTDDSRKSAIDNWLPVTASRNAKWWYSAFHNLTAMVGAGVLSLPYAMSKMGWGPGVVALLLSWIITLFTLWQMVEMHEMVPGKRFDRYHELGQYAFGEKLGLYIVVPQQLLVEVGTCIVYMVTGGKSLKKFHGSVCPTCKDIRTSYWIMIFASVNFVLCQCPSFNSISAVSLAAAIMSIAYSTIAWVASLMKGVQPNVDYGYNAKSTADGVFNFMTALGDVAFAYAGHNVVLEIQATMPSTEEVPSKKPMWNGVILAYIGVAICYFPVAFIGYYVFGNSVEDNILITLEHPIWLIAAANMFVIVHVVGGYQVFSMPVFDMMETLLVKQFKFPPCFTLRFVARTLFVAFTMAIAICVPFFGSLLGFLGGFAFAPTSYFLPCIIWLKVYKPKRFSLSWFVNWTCIVIGVLLMTVSPIGALRNIIISIHNYKFFS 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04938 432 Gene3D Amino acid/polyamine transporter I 17 429 - -
Aip03g04938 432 PANTHER OS05G0424000 PROTEIN-RELATED 4 427 - -
Aip03g04938 432 Pfam Transmembrane amino acid transporter protein 21 417 IPR013057 -
Aip03g04938 432 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 4 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04938 Aip-Chr3 133994882 134002262 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04938 5 432 Organic Solute Cotransporters AT1G24400 72.897 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04938 - - gmx:100786115 701.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04938 03 133994882 134002262 Aip03g04938 03 133994882 134002262 ECH
Aip10g01055 10 13941321 13943934 Aip03g04938 03 133994882 134002262 PCT