Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00992 ATGGCCACCACCGAGAAAGAGGTGAAATTTGAGAACAAGAACAAAGAGCTGAAGCATCTTGGGTTTGTGAGGGTTGCTGCAATTCAAACCTTTGTGGTTGTCACAAATCTGTATGAATACGCAAAGCAAAACTCGGGCCCTTTGAGATCTGCCGTTGGGACGGTTGAGGGCACTGTAACTTCCGTTCTGGGCCCTGTCTACAACAAACTCAAGGATGTCCCAGATGATGTCCTCGTTTTTGTTGACAACAAGGTAGATGATGCTACTCACAAGTTCGGTGAGCATGCTCCTTCTTTTGCTAAGCAGGGTGCTTCCAAAGCAAGGAGTTTGATTCAGAGTCTTGCACATGAAGCCGGACGATTTGCAAGTGAGGTTCAATGTGGAGGGCCAAGAGCAGCTATACATTATGTAACCAGAGAGTCAAAGGATTTGGTGCTAATTAACTCAGTGAAGTTATGGAAAGGACTAAACCACTTCCCACCATTTCATGCACTGGCAGATGTGGCTGTGCCCACTGCTGCTCATTGTTCGGATAAGTATAACCACATAGTTAAGCATTTGAGTGGTAAAGGGTATCCTCTCTCTGGTTATTTGCCTTTGATTCCCGTCGATGACATTGCCAAGGCGTTCAGGCAGGGCGGTGAGGCAAGCATGAACGGAGGAGATGAAGAAGCCTGTAAGAATGGGAAGAGATCATAA 699 0.4649 MATTEKEVKFENKNKELKHLGFVRVAAIQTFVVVTNLYEYAKQNSGPLRSAVGTVEGTVTSVLGPVYNKLKDVPDDVLVFVDNKVDDATHKFGEHAPSFAKQGASKARSLIQSLAHEAGRFASEVQCGGPRAAIHYVTRESKDLVLINSVKLWKGLNHFPPFHALADVAVPTAAHCSDKYNHIVKHLSGKGYPLSGYLPLIPVDDIAKAFRQGGEASMNGGDEEACKNGKRS 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00992 232 Pfam Rubber elongation factor protein (REF) 12 212 IPR008802 -
Aip10g00992 232 PANTHER RUBBER ELONGATION FACTOR-RELATED 2 225 - -
Aip10g00992 232 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 2 225 IPR008802 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00992 Aip-Chr10 12924886 12927179 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00992 - - gmx:100816931 316.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00992 10 12924886 12927179 Aip10g00992 10 12924886 12927179 ECH
Aip10g00992 10 12924886 12927179 Aip03g04962 03 134256069 134257796 PCT