Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04962 ATGGGCACCAACCAGAGTGAGGTTGAGAGGAAGAGTGAGAAAGAGCTCAAGCATCTTGGCTTTGTGAGGATTGCAGCGATTCAAGCCTTTGTTTGCGTCTCAAATCTCTATCAATACGCCAAGCATAACTCTGGCCCTCTCAGATCTGCCGTTGGAGCGGTTGAAGGGACTGTTTCCGCCGTTCTCGGCCCCGTATACAACAAATTCAGGGATGTACCTGACGATCTCCTTGTTTTTGTCGATAATAAGGTGGATGAAGCTAGCCAGAAATTCGAGGAGCATGCACCTCCATTAGTGAAGCAGGTAGCAAGGCAAGCAAAGGGGTTGATTGAGGAAGTGACACAGAAAGCAGAGAAGGTTGTGAGTGAGGCTCAATCCGGAGGAGCAAAAGCAGCTGCACATTATGTTGCTGAGGAGTCCAAACACATTGTGCTAACTGGCTCAGTTAAATTGTGGAACGGTCTAAACCACTATCAACTGTTCCATGCAGTGGCAGAGATGGCTGTTCCCACTGCTGCACACTGGTTGGAAAGCTACAATCATGTGGTTGAGGACATGACTGCTAAGGGTTATGGTGTTTTTCAGTATTTGCCTTTGGTTCCAATTGATGAGATAGCCAAGGCATTTAAACAGGGAGAAGGAGAAGCGAATGTCAATGAGAATGGAGATGGAGGTGTCATTACTGGACAGATAGCACAATCTGAGTAA 708 0.4703 MGTNQSEVERKSEKELKHLGFVRIAAIQAFVCVSNLYQYAKHNSGPLRSAVGAVEGTVSAVLGPVYNKFRDVPDDLLVFVDNKVDEASQKFEEHAPPLVKQVARQAKGLIEEVTQKAEKVVSEAQSGGAKAAAHYVAEESKHIVLTGSVKLWNGLNHYQLFHAVAEMAVPTAAHWLESYNHVVEDMTAKGYGVFQYLPLVPIDEIAKAFKQGEGEANVNENGDGGVITGQIAQSE 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04962 235 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 5 219 IPR008802 -
Aip03g04962 235 PANTHER RUBBER ELONGATION FACTOR-RELATED 5 219 - -
Aip03g04962 235 Pfam Rubber elongation factor protein (REF) 11 211 IPR008802 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04962 Aip-Chr3 134256069 134257796 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04962 - - gmx:100499806 309.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00992 10 12924886 12927179 Aip03g04962 03 134256069 134257796 PCT