Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00963 ATGAGAAATAACAGGAATTCTCTACCAGAGAGAAGGTGGTTCCTAGGCCTGGCCATAGTGGGCCTGGTCGGAGCTGCAGTCTTCATAGTCGTAATGATCCTAACCTCCGACTCCTCCTTAATATGCCCGACGGAACCAATCTACGGTGAAATGCCCAAAGCCCAGGCCCGAGTCCAGGAAGACTACAACCCAACGACGATCCAGCTGAAGGCCATACTCCACTACGCCACGTCACGCATTGTCCCGCAACAATCTCTTGCAGAGATCAAGATCAGCTTCGACGTCCTCAAATCAATGGGCCGGCCATGCAACTTCCTGGTCTTCGGTCTGGGTCACGACTCCCTCATGTGGGCCTCCCTGAACCCGGGCGGAACAACTCTCTTCCTGGAAGAGGATCCTAAATGGGTTCAAACCGTACTCAAGGATGCCCCGTCCCTGCGGGCCCACACTGTCCGGTATCGCACGCGCCTAAGGGACGCGGACCAACTGCTCTTGTCTTACCGCTCCGAGCCCACCTGCGGCCCGGCGGGGGCCCACTTACGTGACAATGTTGAGTGCGAGCTGGCTCTTCACAACCTCCCCGATCAGGTGTATGAGACGGAGTGGGATCTGGTGATGATCGACGCGCCTCGCGGATACTTCCCGGACGCGCCGGGGAGGATGGCGGCGGTGTACTCTGTGGCGGTCATGGCGAGAGGGAGAAAAGGATCCGGTGTGACGCACGTGTTCCTTCACGATGTTGATCGGAGGGTGGAGAAGGTTTATGCTGAGGAGTTTCTTTGTAGGAAGTATCTGGTGAGAGGTGTTGGCAGGCTTTGGCATTTCCAGATACCGCCTTCAAATGACTCTCATACTTCTCAACGTTTCTGTTAA 873 0.5613 MRNNRNSLPERRWFLGLAIVGLVGAAVFIVVMILTSDSSLICPTEPIYGEMPKAQARVQEDYNPTTIQLKAILHYATSRIVPQQSLAEIKISFDVLKSMGRPCNFLVFGLGHDSLMWASLNPGGTTLFLEEDPKWVQTVLKDAPSLRAHTVRYRTRLRDADQLLLSYRSEPTCGPAGAHLRDNVECELALHNLPDQVYETEWDLVMIDAPRGYFPDAPGRMAAVYSVAVMARGRKGSGVTHVFLHDVDRRVEKVYAEEFLCRKYLVRGVGRLWHFQIPPSNDSHTSQRFC 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00963 290 Pfam Polysaccharide biosynthesis 87 275 IPR021148 -
Aip10g00963 290 TIGRFAM A_thal_3515: uncharacterized plant-specific domain TIGR01627 69 290 IPR006514 GO:0045492
Aip10g00963 290 PANTHER OS11G0490100 PROTEIN 3 290 IPR006514 GO:0045492
Aip10g00963 290 Gene3D Vaccinia Virus protein VP39 80 288 IPR029063 -
Aip10g00963 290 PANTHER POLYSACCHARIDE BIOSYNTHESIS PROTEIN 3 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00963 Aip-Chr10 12008606 12009810 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00963 - - gmx:100791951 429.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00963 10 12008606 12009810 Aip10g00963 10 12008606 12009810 ECH
Aip10g00963 10 12008606 12009810 Aip03g04968 03 134360920 134362395 PCT