Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04968 ATGCAGGGGAACGAGAGAACAAAGAGTCGCTACTACAACCTCCTCCCAGAAAACCGATGCTTCGTCTGGCTACTCACCGGACTTGCCATCATCGCCGCCTCCCTCTTCACAGCCACCACACTTCTCCAAACCTCTGACACCACCTTCCTCTGCCCGCTCACAACTAAAACCCGCTTCGCCTCCGCCCAGCAGTCCACCGCAGCCACCACAACGCCGCTCCAGCTCCGAGCAATACTCCACTACGCCACCTCCCACGTGGTGCCTCAGCAGTCCCTCTCCGAGATCACCATAACCTTCGACGTCTTCAAATCCCTGCAGCACAGACCCCTCAACTTCCTCGTCTTCGGCCTCGGCCACGACTCTCTCATGTGGGCCAGCCTCAACCCCACCGGCACCACCCTCTTCTTGGAAGAGGACCCTAAGTGGTTCCACACCGTTCTCGCCGCCGCCCCTGACCTCCACGCCCACACCGTCCGCTACCGGACACAGCTCCAGGAGGCTGATGAGCTTCTCCAGCACTACAGGAAGGAGGAGGCGTGCTGGCCGGCGCGTGCCACTCTGAAAGGGAACGACAAGTGCAGGCTTGCACTTCACGATCTGCCGGAGGAGGTGTACGAGAGGGAGTGGGATCTGGTGATGATTGACGCGCCGAAAGGGTACTTTGCAGAGGCGCCGGGGAGGATGGCGGCGATATTCTCGGCGGCAGTGATGGCCAGGGGGAGAAAAGGATCCGGTGTGACGCACGTGTTCCTACACGATGTGAATCGGAGGGTAGAGAAGCTGTATGCGGAAGAGTTCCTGTGTAAGAAGAATCTTGTGAAAGGTGTTGGCAGGCTATGGCATTTCCAGATTCCGGCCGTGGCTAACACCACCGCTGTCGTTCCCGATCACGATGATGCTCATCGTTTTTGTTAA 915 0.588 MQGNERTKSRYYNLLPENRCFVWLLTGLAIIAASLFTATTLLQTSDTTFLCPLTTKTRFASAQQSTAATTTPLQLRAILHYATSHVVPQQSLSEITITFDVFKSLQHRPLNFLVFGLGHDSLMWASLNPTGTTLFLEEDPKWFHTVLAAAPDLHAHTVRYRTQLQEADELLQHYRKEEACWPARATLKGNDKCRLALHDLPEEVYEREWDLVMIDAPKGYFAEAPGRMAAIFSAAVMARGRKGSGVTHVFLHDVNRRVEKLYAEEFLCKKNLVKGVGRLWHFQIPAVANTTAVVPDHDDAHRFC 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04968 304 PANTHER OS11G0490100 PROTEIN 8 291 IPR006514 GO:0045492
Aip03g04968 304 Pfam Polysaccharide biosynthesis 94 282 IPR021148 -
Aip03g04968 304 PANTHER POLYSACCHARIDE BIOSYNTHESIS PROTEIN 8 291 - -
Aip03g04968 304 Gene3D Vaccinia Virus protein VP39 89 294 IPR029063 -
Aip03g04968 304 TIGRFAM A_thal_3515: uncharacterized plant-specific domain TIGR01627 76 290 IPR006514 GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04968 Aip-Chr3 134360920 134362395 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04968 - - gmx:100820087 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00963 10 12008606 12009810 Aip03g04968 03 134360920 134362395 PCT