Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00079 ATGTTCGCCGTGAAGAAGCTCGTTGAAAAAGCCTCCATAAAGAAGCCAGGAGGAAATTCCTCAGATGGATTAAAAGCAAGTGATGTGGATCCAAGGTTGTTATTTCATAATGGGGTGCCATCTGGTGCTGCAAACTTTGCTTTTGACAATACTCACATGATACTGGCCATTTCTACAAAGGATGGTCGGATTAAACTATATGGTAAAGGTAATTCCCAAGGCCTACTTGAATCTAGTGAGCCATTGCCTAGCAAGTTCTTACAGTTCATCCAGAACCAAGGCATTCTCATAAATGTTACTTCCAATAATCATATTGAGGTTTGGGACATAGACAAGAAACTTTTGTCAGATGCTTACATTGTGAAGGAAGAAATCACTTCCTTTGCAGTCATACAACATAGCCTATATATGTACATTGGATATTCTAATGGTAATATTTCAGTGTTGAAGATTGATCAAGAACCTTGGCATATGGTTCAAATGCAGTACACAATACCCCTCTCGGCTTCTTACGGAGATTCTGAAGTGCCTGATGATACTGTTGTGACACATATTCTGCCTCAACCAGCAGCTGAAAGTAAAagGGTTCTGATAATCTTTAGAAATGGCCAGATAATTTTGTGGGATATTAGAGAAAGCAAAACTGTTTTCAAAACTGGTGGAAACATGTCACAACCACTCCATAGTGAAACAAAGAAAGTTTCTTCTGCATGTTGGTCATGTCCTTTTGGAAGCAAAGTTGTTGTAGGCTACAACAATGGAGAGATCTTCATTTGGAGTATCCCTTCCCTAAACGTAGGAAGAGACAGTTCAGCATCAGCGCCGGATCATAATAGTACACAGAACACTCCTCTTCTTAAACTTAACTTGGGATACAAGTCAGAGAAAATTCCCATAGGATCAATGAAATGGATTTATGCTGAAGGAAAGGCTAGTAGATTATATGTCATGGGAGATTGTGATGATGCATCTTCTTTAAACTCATTGCAGGTAGTGTTATTGAATGATAACATAGAATCACGCACGATTAAGTTGGGCCTTCATTTGTCTGAAAGTTGTGTTGCCATGGAGCTCATATCAGCTTCTTCAAATGAACAAAGCAAGCACAGACAAGAATCTTTGATTCTGATTGGGAAATCAGGCCATATATATCAATATGATGATGGTTTGATTGAAAGATATCTGATACAAAGCCAATCCAAGTCCTCACCCTCACTTCCAAAGGAAGTGACTGTGAAATTACCATTTGCAGATTCAAGCATCACAACTTCAAAATTCATATCCAACACTACCAATATATTAAACATTGAAGAGGAGTATTATAGAGAGCTGATAAAAAATTATCCACCACTCATTACGGTCGAAACTAATCAAAAGGATGGGTCTACACTGAGTTCTGCCAAGTTTACTGGATTCTCAAAAGTTCAAAATCTGTACATAACTGGACACAGCAATGGAGCTCTAAACTTCTGGGATGCTTCATGTCCCCTTTTCATCCCAATTCTGCAGTTAAAGCAACAGAGTGAAAATGATTTTTCTTTAAGTGGCATACCCTTGACAGCATTATTTTTTGATAGCACATATCCTCTTCTTGTTTCTGGTGATCAGAGCGGAACGGTTCGCTTATTTAGATTCAAACCTGAACCATATACTACCAACAGCTTCATGTCTCTTACTGGCAGTTCAAAGAAAGGAACTGATCATATAATCCAGAGTGTGAAAGTTCTGAAGACTAATGGTGCTGTGCTTTCTATGAACATAAATCACAGTTCAACACATCTTGCAATTGGTTCTGATCAAGGACATGTTTCAGTTTTTAGCATGGATGGACCAACATTGCTGTATCAGAAAAACATTGCTAGCGAAATATCCGCCGGCATTGTCGATCTACAGTTCCTAACATGCAGTCTGCAGGGTTTTGAGAAGAACATTCTAGCGGTCGGAACAAAGGACTCATCTATTTTTGCACTTGATACTGAAACTGGAAACACACTTGGCAATGGAAGTGTTCATCCAAAGAAGCCCTCTAGAGCTCTATTTATGCAGGTGTTGGAGGGACAGGGTAACAGTGAGGATGCAACAACAAAGCAATCATATATTCTGCTTTGTTCTGAGAAGGCTTTGTATGTCTATTCATTAGTTCATGCTGTTCAGGGAACAAAAAAGGTGCTCTATAAGAAGAAGTTTCATTCTTCTTCATGTTGCTGGGCATCAACATTTCACAGCAATAATGATATTGGCCTTATGCTCCTTTTCACCAATGGAAAAGTAGAATTAAGGTCTTTGCCGGAATTATCCTTGATTGTGGAGACTTCTATTAGAGGTTTCAACTATTCGCCTCCAAAACTTGGATCATTTTCTGACATCCAGATGTGTTGTTCATCAAGAGGAGATCTTGTTTTGGTTAGTGGTGATCAAGAAATTCTTGTGTTCTCAACATTGGTCCAAAGCAAAATTTTCAGGCTTTTGGATTTTGTCAGCACCATCTACAGCAAAGAAAGGATGACATCACAAGAAGAGCTTGTCCCTAGCCAAGCCATTCATAAGGAAAAGAAAAAGGGAATATTCAGTTCAGTTATCAAAGATCTCACCGGTGGTAAAGAAAAGCATGCCCCGATTGCGGAAACAGAAGATTCTAAAGAGAGTATCCAGGAACTCTCAGTGATCTTTTCGAATCCGAATTTTCCTTCTGAGACAGATAATAATGATAACCTGACTGCTGATGAAGATGATCTTGATCTAAATATAGATGACATTGACATAGATGATCATGAAGAAAAACACAGAGAACAAAACAAATTGGGATTGGGAGCTCTTAACAAGAAGAAATTGGCTGGAAAGTTTCATGCTCTAAAAGGTAAGTTGAAAGAGATGAAGGGAAACATTCACAAAACATCAGCAAAGGAAGATCAACAAGAAGAGCAAGCCGGAACAGTTGATCAAATTAAGAAAAAATATGGATTCTCTTCTTATTCTTGTTCCAATGAAACAAGTGCTGCTAAACTGTCAGAAAGCAAGCTGCGTGACAACTTGAACAAACTTCAGGGCATTAATGTTAAAACTACAGAAATGCAAGACACAGCAAAGTCATTTTCATCATTGGCAAATCAAGTGCTCCGAACAGCAGAACAAGATAGACGAAGTTCATAA 3150 0.3857 MFAVKKLVEKASIKKPGGNSSDGLKASDVDPRLLFHNGVPSGAANFAFDNTHMILAISTKDGRIKLYGKGNSQGLLESSEPLPSKFLQFIQNQGILINVTSNNHIEVWDIDKKLLSDAYIVKEEITSFAVIQHSLYMYIGYSNGNISVLKIDQEPWHMVQMQYTIPLSASYGDSEVPDDTVVTHILPQPAAESKRVLIIFRNGQIILWDIRESKTVFKTGGNMSQPLHSETKKVSSACWSCPFGSKVVVGYNNGEIFIWSIPSLNVGRDSSASAPDHNSTQNTPLLKLNLGYKSEKIPIGSMKWIYAEGKASRLYVMGDCDDASSLNSLQVVLLNDNIESRTIKLGLHLSESCVAMELISASSNEQSKHRQESLILIGKSGHIYQYDDGLIERYLIQSQSKSSPSLPKEVTVKLPFADSSITTSKFISNTTNILNIEEEYYRELIKNYPPLITVETNQKDGSTLSSAKFTGFSKVQNLYITGHSNGALNFWDASCPLFIPILQLKQQSENDFSLSGIPLTALFFDSTYPLLVSGDQSGTVRLFRFKPEPYTTNSFMSLTGSSKKGTDHIIQSVKVLKTNGAVLSMNINHSSTHLAIGSDQGHVSVFSMDGPTLLYQKNIASEISAGIVDLQFLTCSLQGFEKNILAVGTKDSSIFALDTETGNTLGNGSVHPKKPSRALFMQVLEGQGNSEDATTKQSYILLCSEKALYVYSLVHAVQGTKKVLYKKKFHSSSCCWASTFHSNNDIGLMLLFTNGKVELRSLPELSLIVETSIRGFNYSPPKLGSFSDIQMCCSSRGDLVLVSGDQEILVFSTLVQSKIFRLLDFVSTIYSKERMTSQEELVPSQAIHKEKKKGIFSSVIKDLTGGKEKHAPIAETEDSKESIQELSVIFSNPNFPSETDNNDNLTADEDDLDLNIDDIDIDDHEEKHREQNKLGLGALNKKKLAGKFHALKGKLKEMKGNIHKTSAKEDQQEEQAGTVDQIKKKYGFSSYSCSNETSAAKLSESKLRDNLNKLQGINVKTTEMQDTAKSFSSLANQVLRTAEQDRRSS 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00079 1049 Gene3D - 524 770 IPR015943 GO:0005515
Aip10g00079 1049 Gene3D - 26 170 IPR015943 GO:0005515
Aip10g00079 1049 PANTHER TRANSDUCIN/WD40 REPEAT PROTEIN 4 1047 - -
Aip10g00079 1049 SUPERFAMILY WD40 repeat-like 472 814 IPR036322 GO:0005515
Aip10g00079 1049 SUPERFAMILY WD40 repeat-like 45 609 IPR036322 GO:0005515
Aip10g00079 1049 Gene3D - 176 523 IPR015943 GO:0005515
Aip10g00079 1049 Pfam Lethal giant larvae(Lgl) like, C-terminal 697 826 IPR013905 -
Aip10g00079 1049 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 4 1047 - -
Aip10g00079 1049 Coils Coil 955 975 - -
Aip10g00079 1049 SMART WD40_4 447 492 IPR001680 GO:0005515
Aip10g00079 1049 SMART WD40_4 569 607 IPR001680 GO:0005515
Aip10g00079 1049 SMART WD40_4 505 544 IPR001680 GO:0005515
Aip10g00079 1049 SMART WD40_4 28 68 IPR001680 GO:0005515
Aip10g00079 1049 SMART WD40_4 111 150 IPR001680 GO:0005515
Aip10g00079 1049 SMART WD40_4 220 260 IPR001680 GO:0005515
Aip10g00079 1049 CDD R-SNARE_STXBP5_6 981 1040 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00079 Aip-Chr10 713680 726625 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00079 - - gmx:100811900 1564.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00307 05 3456897 3464666 Aip10g00079 10 713680 726625 PCT