Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00307 ATGTTTGTGAAGAAATTTGTAGAGAAAGCATCCACAAAGAAGGGTAGCGGAAATTCATTAGATGGCTTAAAAGCTAAAGATGTGGATCTACGGCTGGTATTTCATCAAGGGCTACCATCCTGTGGTGTCAAATTTGCCTATGATCACATTCACAAGACACTTGCTATTTCTACCAGGCATATTCTTCTTCTACAAATATATAAATCTACCaaaattagccgtcaaatcaattattacCTGGTTTCTGTTCTTGATTTTGTGTACTCAAGGGATGGACGAATTAAACTGTTTGGAAAAGATAATGCACAAGTGCTACTTGAGTCCACTGATGCAGTGCCTAGCAAATTCTTACAGTTCATCCATAACCATGGCATCCTCATAAATGTCACTGTCAATAACTATATTGAGGCAAGTATACTTGTATGGGACATAGAAAAGAAGCTGATGTCTGATGTTTACATTGTTAAAGAAGAAATCACTTGCTTTTCAGTCATTCAGCATAGCCTTTACATGTATATAGGAGTCTCTAATGGTAATATATCAGTATTGAAGCTTGATCAAGAACCATGGCATATGGTTAAAATGAAATACACCATACCCCTCTCTGCCTCTTATGGGAATTCAGCTGAAATGGCTGAAAATATTGTTGTGACACACATACTGCCTCAACCCTTTTCTGAAAGCAAGAGAGTTCTTATAATCTTTAGAAATGGACAGATGGTATTGTGGGACATTCGAGAAAGCCGGTCCGTTTTCAGAACCGGTGGAAACATGTCGCAGCAATTGTATAGCGAAACAAAGAAGGTGTCTTCTGCTTGTTGGGTGTGTCCTTATGGAACCAAGGTGGTTGTAGGCTACAACAATGGAGAGATCTACATTTGGGGAATTCCTTCTCTTAACAAAGGAAATGTTCCAACAATTGATTATAGCAGCATTCAAAACACTCCTATTTTCAAGCTTAACTTGGGATACAAGTCAGACAAAACATCTATAGGATCTCTCAAATGGACTTATGCCGAAGGAAAGGCGAGCCGATTATATGTCATGGGAGCTTCCGAATATGCATCTTCAAATTCTGTGCAGCAGGTGGTGTTGTTGAATGAACAAATCGAATCTAGAACAACTAAGTTGGGACTTCATTTGTCTGAAAGTTGTATTGACATGGAGATCATATCAACCTCAATTGACCAAAACAAGCATAAACAAAGTTCTTTCCTTTTGCTTGGAAAATCAGGCCATGTATATGTGTATGATGATAGTTTGATTGAAAGATATCTACTGCAAAACCAATCGAAGTCCAGTTCCACATTGCCAAAGGAAATGGTTGTAAAGTTACCAATGGCAGATGCAAGCATCACGACAGCAAAATTCATCTGCAACAATACTAGTATGTTAAATTCTGGAGATGAGTATTATAGTCAGAAGATAAAAAACTATCCACCCCTTATTCCCATAGAAACAAGTTACAAAGATGGGATAAACCTTAGTTCTGCCAACTTCAATGGATTTTCAAGTGTAAAAAATTTGTATATAACTGGACACAGCAATGGAGCCATAACTTTTTGGGATGCATCATGTCCCTACTTCACCCCAATTTTGCAATTAAAGCAACAGAGTGAAAATGATTTTTCTTTGAGTGGTATACCATTGACGGCATTATATTTCAATATCAACTCTCCTCTCCTTGTTTCTGGTGACCAGAGTGGAATGGTTCGGATATTTAGATTCAAACCAGAACCATATGCCTCCAGCTTCATGTCTCTCACTGGAGGCTCAAAGAAAGGGACTGATCATGTGATCCAAAGCATGAAACTTGTAAAGACTACTGGTGCTGTACTTTGTATGAACATGGATCACTATTCAAAGCATCTTGCCGTTGGTTCTGATCAAGGAAATGTTTCAATCATTGTCATAGATGGCCCTTGTGTATTATATCAGAAAAATATAGCAAGTGAAATTTCTACTGGTATAATCTCCCTGCAGTTTGTGACCTGCAGTTTGCATGGTTTTGAGAAAAATGTATTAGCAGTCGGAACAAGAGACTCGTCTGTTCTGGCATTAGATAGCGAAACTGGAAACACGCTCAGTGCCGAAACAGTTCATCCTAAGAAGCCCTCCAGAGCTTTATTCATGCAGGTCATTTCTGTTATACTATTTGAACCAAACACAGGATCAATTACAGAAGATGGCCTGGACTTGAGAGCAGGGAATCATGTTGGGGATGCAACAACAAAGCAGTTGTATATTTTGCTGTGTTCTGAGAAGGCTGCATATGTCTATTCTTTCGTCCATGCTACGCAGGGAGTTAAAAGGGTGCTTTACAAGAAGAAGTTTCATTCCTCCTCCTGTTGTTGGGCTTCAACATTTTACAGCTCCTCTAATATTGGCCTTGTGCTCCTTTTCACCAGTGGCAAAGTAGAATTAAGGTCTTTGCCTGAGTTATCTCTGATAGAGGATGCTTCAATAAGAGGTTTCACTTATTCATCTCCAAAACTGAAGTCGCTTTCCGACTCCCAGATATGTTGTTCATCCAGAGGAGATATTGTTGTGGTGAATGGTGACCAGGAAATTTTTGTTGTCTCATTGTTAGTCCACAGGAATATTTTCCGACTGTTGGACTCTGTTACCTGCATTGAAAGGAATGAAAGGATGCCATCACAAGAAGAGCTCGCTCCTAGTCCTGTTTCCCAAAAGGAAAAGAAGAAGGGTATATTCAGCTTAGTTATGAAAGAATTTACCGGAAGTAAAGAAAAGGATGTGCCCTCCATGGAAAAAGAAGATCCAAGAGAAAGTATCCGCGAACTCTCAGCAATATTTTCAAATGCAAATTTTCCAAGTGATGCTGACAATAGTGATAACTGGACCATGCATGAAGATAAGCCTGAATTAACATTAGATGACATTGATCTAGATGATCATGTAGAAAAACGAAAAGAACAAAGCATATTAGGAGCTCTTAATAAAAAGAAATTGGCTGGCAAATTGAATGCTTTCAAAGGAAGATTGAAAGAGAAGAAGGGCAACAATCAGAAAACACCAGATAACAATAAGGAAGAGCCACAAGATGAGAAAGCTGGTGCAGTTGATCAAATTAAGAAGAAATATGGATTTTCTTCCTCTTATTCGTCATCATCCCATGTAAGAATTATGTTGCTTAACTTGCATACTATTGTGATCTTGGAAACTTTTGAAGATATCAACCTACGAGCAACAGAGATGCAAGATACAGCAAAATCATTTTCATCATTGGCAAAACAAGTGCTACGAACTGCTGAACAGGATAGACGAAATATATAA 3297 0.3825 MFVKKFVEKASTKKGSGNSLDGLKAKDVDLRLVFHQGLPSCGVKFAYDHIHKTLAISTRHILLLQIYKSTKISRQINYYLVSVLDFVYSRDGRIKLFGKDNAQVLLESTDAVPSKFLQFIHNHGILINVTVNNYIEASILVWDIEKKLMSDVYIVKEEITCFSVIQHSLYMYIGVSNGNISVLKLDQEPWHMVKMKYTIPLSASYGNSAEMAENIVVTHILPQPFSESKRVLIIFRNGQMVLWDIRESRSVFRTGGNMSQQLYSETKKVSSACWVCPYGTKVVVGYNNGEIYIWGIPSLNKGNVPTIDYSSIQNTPIFKLNLGYKSDKTSIGSLKWTYAEGKASRLYVMGASEYASSNSVQQVVLLNEQIESRTTKLGLHLSESCIDMEIISTSIDQNKHKQSSFLLLGKSGHVYVYDDSLIERYLLQNQSKSSSTLPKEMVVKLPMADASITTAKFICNNTSMLNSGDEYYSQKIKNYPPLIPIETSYKDGINLSSANFNGFSSVKNLYITGHSNGAITFWDASCPYFTPILQLKQQSENDFSLSGIPLTALYFNINSPLLVSGDQSGMVRIFRFKPEPYASSFMSLTGGSKKGTDHVIQSMKLVKTTGAVLCMNMDHYSKHLAVGSDQGNVSIIVIDGPCVLYQKNIASEISTGIISLQFVTCSLHGFEKNVLAVGTRDSSVLALDSETGNTLSAETVHPKKPSRALFMQVISVILFEPNTGSITEDGLDLRAGNHVGDATTKQLYILLCSEKAAYVYSFVHATQGVKRVLYKKKFHSSSCCWASTFYSSSNIGLVLLFTSGKVELRSLPELSLIEDASIRGFTYSSPKLKSLSDSQICCSSRGDIVVVNGDQEIFVVSLLVHRNIFRLLDSVTCIERNERMPSQEELAPSPVSQKEKKKGIFSLVMKEFTGSKEKDVPSMEKEDPRESIRELSAIFSNANFPSDADNSDNWTMHEDKPELTLDDIDLDDHVEKRKEQSILGALNKKKLAGKLNAFKGRLKEKKGNNQKTPDNNKEEPQDEKAGAVDQIKKKYGFSSSYSSSSHVRIMLLNLHTIVILETFEDINLRATEMQDTAKSFSSLAKQVLRTAEQDRRNI 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00307 1098 SUPERFAMILY WD40 repeat-like 549 862 IPR036322 GO:0005515
Aip05g00307 1098 MobiDBLite consensus disorder prediction 998 1027 - -
Aip05g00307 1098 PANTHER TRANSDUCIN/WD40 REPEAT PROTEIN 88 1096 - -
Aip05g00307 1098 Gene3D - 80 338 IPR015943 GO:0005515
Aip05g00307 1098 Pfam Lethal giant larvae(Lgl) like, C-terminal 624 886 IPR013905 -
Aip05g00307 1098 PANTHER TRANSDUCIN/WD40 REPEAT PROTEIN 1 60 - -
Aip05g00307 1098 Gene3D - 340 727 IPR015943 GO:0005515
Aip05g00307 1098 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 1 60 - -
Aip05g00307 1098 SUPERFAMILY WD40 repeat-like 138 645 IPR036322 GO:0005515
Aip05g00307 1098 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 88 1096 - -
Aip05g00307 1098 SMART WD40_4 596 637 IPR001680 GO:0005515
Aip05g00307 1098 SMART WD40_4 536 575 IPR001680 GO:0005515
Aip05g00307 1098 SMART WD40_4 255 295 IPR001680 GO:0005515
Aip05g00307 1098 SMART WD40_4 438 523 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00307 Aip-Chr5 3456897 3464666 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00307 - - gmx:100782049 1533.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00307 05 3456897 3464666 Aip05g00307 05 3456897 3464666 ECH
Aip05g00307 05 3456897 3464666 Aip10g00079 10 713680 726625 PCT