Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g04058 ATGTGGTCAAAGCCTACGTTTAGGAGAAAGACTAAGATTGTTTGCACCATTGGGCCTTCTACGGATACAAGGGAAATGATTTGGAAGCTGGCCGAGGCTGGGATGAATGTTGCGCGTTTGAATATGTCTCATGGTGACCATGCTTCTCATCAGAAAGTTATCGATTTGGTAAAGGACTATAATGCACAATCCAAGGATAATGTAATTGCAATAATGCTCGACACCAAGGGTCCTAAGGTTAGGAGTGGGGACCTGCCACAACCAATTACATTAGAACCTGGGCAAGAGTTCACTTTCACTATCCGGAGGGGTGTCGGAACCACAGATTGTGTTAGCGTTAACTATGATGATTTTGTTAATGATGTAGCAGTTGGGGACATGCTTCTTGTTGATGGTGGTATGATGTCATTGATGGTAAAGTCTAAGACCGAGGATTCTGTAAAATGTGAAGTAGTTGATGGAGGAGAGCTTAAATCGAGGAGACATTTGAATGTTAGAGGAAAAAGCGCAACATTGCCTTCAATCACTGAGAAGGACTGGGATGACATTAAATTTGGAGTGGACAACCAAGTTGACTTTTATGCCGTTTCCTTTGTTAAGGATGCACAAGTAGTTCATGAACTGAAGAACTATCTGAAAAGCTGTGGTGCCGATATACATGTCATTGTAAAAATTGAAAGTGCAGACTCCGTTCCGAACTTGCATTCAATAATTACAGCATCTGATGGGGCTATGGTTGCAAGAGGAGATCTTGGGGCTGAGCTACCTATTGAGGAAGTTCCACTTTTGCAGGAGGAGATAATCAGAATATGCCGTAGCATGGGAAAGGCTGTGATTGTTGCAACAAATATGCTTGAAAGCATGATTGTTCACCCAACCCCAACCAGAGCAGAGGTATCTGATATTGCAATTGCTGTTCGAGAAGGTTCTGATGGAATAATGCTTTCTGGTGAAACTGCTCATGGAAAGTTCCCACTAAAAGCTGTGAAAGTAATGCACACAGTAGCATTACGGACAGAAGCCACTATACCAGGTAGTCAGATGCCACCTAATATTGGTCAAGTATTCAAGAACCACATGAGCGAGATGTTTGCATACCATGCAACCATGATGTCCAACACCCTTGGAACCTCAACTGTTGTCTTCACTAGATCAGGCTTCATGGCTATTCTTCTAAGCCACTATCGACCAACTGGCACCATATTTGCTTTTACAGACCAGAAGCGGATACAGCAGCGGCTGGCTTTGTATCAAGGAGTTTGTCCTATATACATGGAATTCTCTGATGATGCTGAAGAGACATTCAAAAGAGCCTTGGATTTGTTGCAGAGGCAAGGAATGGTGAAGGAAGGAGAAGAAGTAGCACTTGTACAAAGTGGAAGACAGCCCATATGGAGGTTCCAATCCACTCACAACATCCAGGTCAGAACAGTGTAA 1437 0.4322 MWSKPTFRRKTKIVCTIGPSTDTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKDYNAQSKDNVIAIMLDTKGPKVRSGDLPQPITLEPGQEFTFTIRRGVGTTDCVSVNYDDFVNDVAVGDMLLVDGGMMSLMVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNQVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSVPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRICRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGSDGIMLSGETAHGKFPLKAVKVMHTVALRTEATIPGSQMPPNIGQVFKNHMSEMFAYHATMMSNTLGTSTVVFTRSGFMAILLSHYRPTGTIFAFTDQKRIQQRLALYQGVCPIYMEFSDDAEETFKRALDLLQRQGMVKEGEEVALVQSGRQPIWRFQSTHNIQVRTV 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g04058 478 Pfam Pyruvate kinase, alpha/beta domain 366 458 IPR015795 -
Aip09g04058 478 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 3 343 IPR015813 GO:0003824
Aip09g04058 478 Pfam Pyruvate kinase, barrel domain 9 345 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aip09g04058 478 Gene3D - 79 172 IPR015806 GO:0004743|GO:0006096
Aip09g04058 478 Gene3D - 11 336 IPR040442 -
Aip09g04058 478 Gene3D - 351 478 IPR036918 -
Aip09g04058 478 PRINTS Pyruvate kinase family signature 317 333 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aip09g04058 478 PRINTS Pyruvate kinase family signature 67 83 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aip09g04058 478 PRINTS Pyruvate kinase family signature 273 297 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aip09g04058 478 PRINTS Pyruvate kinase family signature 191 205 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aip09g04058 478 PRINTS Pyruvate kinase family signature 298 316 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aip09g04058 478 PRINTS Pyruvate kinase family signature 221 247 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aip09g04058 478 PRINTS Pyruvate kinase family signature 248 272 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aip09g04058 478 SUPERFAMILY PK C-terminal domain-like 327 478 IPR036918 -
Aip09g04058 478 SUPERFAMILY PK beta-barrel domain-like 78 169 IPR011037 -
Aip09g04058 478 TIGRFAM pyruv_kin: pyruvate kinase 9 478 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aip09g04058 478 PANTHER PYRUVATE KINASE 1 478 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aip09g04058 478 ProSitePatterns Pyruvate kinase active site signature. 219 231 IPR018209 GO:0004743|GO:0006096
Aip09g04058 478 PANTHER PLASTIDIAL PYRUVATE KINASE 2 1 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g04058 Aip-Chr9 146872750 146877292 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g04058 K00873 - gmx:100818193 911.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g04058 09 146872750 146877292 Aip09g04058 09 146872750 146877292 ECH
Aip05g03937 05 147597591 147601973 Aip09g04058 09 146872750 146877292 PCT