Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03937 ATGGCTCAGATTGTGGCAACAACACGATCCATTCAGAGCACCCTTTTGTGCCCCACTTCAGGATCTGCAAATGAAAGGGCGCGTAATCTCTTAAAGCCTCCAACTTTTTCCTCCAAGGTTTTCTCATCAAATGGGATCAACAAGTGCCCCCAAGATGCATTCAGAAGCTGCAGGATCAATGCGAGGAAATCTGCATCTGTTGAAGTTATCCCTGTCTCCGCTGAAGATGATCCAAAGATTGAGGAGCAATTGCGTGGTGTGCCGCAACTTCTTGATGCTTCGAATGGAATGTGGTCGAAGCCCACGTTTAGGCGCAAGACGAAGATAGTTTGTACTATTGGTCCTTCCACCAATACCAAGGAAATGATCTGGAAGCTGGCTGAGGCCGGCATGAATGTCGCTCGCCTCAATATGTCTCATGGAGACCATGCTTCACATCAGAAAGTTATTGACTTGGTTAAAGAATATAATGCACAAGCAAAGGACAATGTAATTGCAATTATGCTTGATACTAAGGGTCCTGAGGTGAGGAGTGGGGATCTGCCACAACCAATCATGCTATCAACTGGACAGGAATTCACTTTTACTATCCAAAGAGGTGTTGGAACTGCAGAGTGTGTTAGTGTGAACTATGATGATTTCGTCAATGATGTGGAACCTGGGGACATGCTTCTTGTTGATGGTGGTATGATGTCGTTGATGGTAAAATCTAAGACAGAAGATTCCGTTAAATGTGAAGTTGTTGACGGAGGAGAGCTCAAGTCAAGAAGGCATTTAAATGTTAGAGGAAAAAGTGCAACACTTCCTTCCATCACTGAGAAGGATTGGGATGATATCAAATTCGGAGTGGATAACCAAGTTGATTTCTATGCTGTCTCCTTTGTTAAGAGTGCTGAAGTTGTGCATGAACTGAAGAATTATTTGAAAAACTCTGGAACTGATATACATGTCATCGTAAAAATTGAAAGTGCAGACTCTATACCAAACTTGCATTCCATTATCACTGCGTCTGACGGGGCTATGGTTGCCAGAGGAGATCTTGGTGCTGAGCTTCCTATTGAAGAGGTTCCACTTTTGCAGGAAGAGATAATCAACTTGTGCCGTAGCATGGGAAAAGCTGTTATTGTGGCCACAAATATGCTGGAAAGCATGATTGTTCACCCAACACCAACCAGAGCGGAAGTATCGGACATAGCAATTGCTGTTCGAGAAGGTTCTGATGCAATAATGCTGTCTGGAGAAACTGCCCACGGAAAGTATCCGCTAAAAGCTGTGAAAGTAATGCACACAGTTGCATTACGTACAGAGGCTACTATACCAGGGGGTCAAATGCCGCCTAATATCGGTCAAGTGTTCAAGAACCACATGAGTGAGATGTTTGCATACCATGCAACCATGATGTCTAACACCCTGGGCACCGCAACCGTCGTTTTTACGAGAACGGGTTTCATGGGCATCCTATTGAGCCACTATCGACCTTCTGGGACCATATTCGCCTTTACTGATGATAAACGAGTACAACAGAGATTGGCACTGTATCAAGGAGTCTGCCCTATATACATGGGATTTTGCGATGATTCTGAAGCGACCTTCCGAAGAGCCTTGGATTTGTTGAAGAATCAAGGAATGGTGAAAGAAGGAGAAGAAGTAGCACTTGTACAAAGTGGTAGGCAACCTATATGGAGGTCCCAAACCACACACAATATCCAAGTTCGAAAAGTGTAA 1725 0.4417 MAQIVATTRSIQSTLLCPTSGSANERARNLLKPPTFSSKVFSSNGINKCPQDAFRSCRINARKSASVEVIPVSAEDDPKIEEQLRGVPQLLDASNGMWSKPTFRRKTKIVCTIGPSTNTKEMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQAKDNVIAIMLDTKGPEVRSGDLPQPIMLSTGQEFTFTIQRGVGTAECVSVNYDDFVNDVEPGDMLLVDGGMMSLMVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNQVDFYAVSFVKSAEVVHELKNYLKNSGTDIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIINLCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGSDAIMLSGETAHGKYPLKAVKVMHTVALRTEATIPGGQMPPNIGQVFKNHMSEMFAYHATMMSNTLGTATVVFTRTGFMGILLSHYRPSGTIFAFTDDKRVQQRLALYQGVCPIYMGFCDDSEATFRRALDLLKNQGMVKEGEEVALVQSGRQPIWRSQTTHNIQVRKV 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03937 574 SUPERFAMILY PK beta-barrel domain-like 174 265 IPR011037 -
Aip05g03937 574 Pfam Pyruvate kinase, barrel domain 105 440 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aip05g03937 574 Pfam Pyruvate kinase, alpha/beta domain 464 555 IPR015795 -
Aip05g03937 574 ProSitePatterns Pyruvate kinase active site signature. 315 327 IPR018209 GO:0004743|GO:0006096
Aip05g03937 574 Gene3D - 447 574 IPR036918 -
Aip05g03937 574 SUPERFAMILY PK C-terminal domain-like 423 574 IPR036918 -
Aip05g03937 574 PRINTS Pyruvate kinase family signature 163 179 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aip05g03937 574 PRINTS Pyruvate kinase family signature 287 301 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aip05g03937 574 PRINTS Pyruvate kinase family signature 317 343 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aip05g03937 574 PRINTS Pyruvate kinase family signature 344 368 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aip05g03937 574 PRINTS Pyruvate kinase family signature 369 393 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aip05g03937 574 PRINTS Pyruvate kinase family signature 394 412 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aip05g03937 574 PRINTS Pyruvate kinase family signature 413 429 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aip05g03937 574 Gene3D - 107 432 IPR040442 -
Aip05g03937 574 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 96 439 IPR015813 GO:0003824
Aip05g03937 574 Gene3D - 175 268 IPR015806 GO:0004743|GO:0006096
Aip05g03937 574 PANTHER PYRUVATE KINASE 53 574 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aip05g03937 574 PANTHER PLASTIDIAL PYRUVATE KINASE 2 53 574 - -
Aip05g03937 574 TIGRFAM pyruv_kin: pyruvate kinase 105 574 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03937 Aip-Chr5 147597591 147601973 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03937 K00873 - gmx:100815822 988.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03937 05 147597591 147601973 Aip05g03937 05 147597591 147601973 ECH
Aip05g03937 05 147597591 147601973 Aip09g04058 09 146872750 146877292 PCT