Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g04042 ATGAATGAAGTAATACTAAGGGTGGAAGCACTACATGAGAGGAAATGTAAGAAAAAAGCCATGAAGATAGTGTCGAATATTGCAGGGATTGAGTCAGTGTCAGTGGACATGAATGAAAACAAGTTGACTTTGACTGGGGAAATGGATGCTGTGGAAGTTGTTGGGAAGCTGAGGAAGCTGTGTCACACCGAAATACTGTCTGTTGGACCAGCCACAGCCACAGCCACAGCCAAACAAGAGCCAAAGAAGAACAATAAAGAGCATACTACAAATCTGGAAGCTTCTATTCTACCCATTCAAGCTTATCATTATTATTACACAAGTATGGAGGAGAATCCCAATGCCTGCGTTATCTTCTGA 360 0.4194 MNEVILRVEALHERKCKKKAMKIVSNIAGIESVSVDMNENKLTLTGEMDAVEVVGKLRKLCHTEILSVGPATATATAKQEPKKNNKEHTTNLEASILPIQAYHYYYTSMEENPNACVIF 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g04042 119 PANTHER ION-BINDING PROTEIN, PUTATIVE-RELATED 1 118 - -
Aip09g04042 119 Gene3D - 1 73 - -
Aip09g04042 119 Pfam Heavy-metal-associated domain 6 59 IPR006121 GO:0046872
Aip09g04042 119 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 118 - -
Aip09g04042 119 SUPERFAMILY HMA, heavy metal-associated domain 2 61 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g04042 Aip-Chr9 146723935 146724612 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g04042 - - gmx:100793345 128.642
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g04042 09 146723935 146724612 Aip09g04042 09 146723935 146724612 ECH
Aip05g03912 05 147303138 147304808 Aip09g04042 09 146723935 146724612 PCT