Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03912 ATGAAGAAAGCAGTGTTCAAGTTAGACATAAACGGTGACAAAGCCAAGCAAAAAGCTATGAAGGCAGTCTCTGGCATCCAAGGAGTTGCTTCAGTATCAATGGATATGGCAGAGAAGAAATTAACATTAACAGGGGACATTGATCCAGTCCATGTAGCAGGGAAATTACGAAAATGTTGTCACACAGAGATAGTTTCTGTTGGACCAGCCAAAGAGGAAGAAAAGAAGGCATCATCAGAAGAACCTGCTATCAAAGTTTTTGAAACCTATCCTCTTCATTATTATCAAGCCAGAGCACCTTATTATGTTTCAAGTATGGAGGAAAATCCTAATTCATGTGTCATTTGCTAA 351 0.3903 MKKAVFKLDINGDKAKQKAMKAVSGIQGVASVSMDMAEKKLTLTGDIDPVHVAGKLRKCCHTEIVSVGPAKEEEKKASSEEPAIKVFETYPLHYYQARAPYYVSSMEENPNSCVIC 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03912 116 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 1 116 - -
Aip05g03912 116 Pfam Heavy-metal-associated domain 10 58 IPR006121 GO:0046872
Aip05g03912 116 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 116 - -
Aip05g03912 116 Gene3D - 1 73 - -
Aip05g03912 116 SUPERFAMILY HMA, heavy metal-associated domain 3 60 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03912 Aip-Chr5 147303138 147304808 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03912 - - gmx:100800008 133.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03912 05 147303138 147304808 Aip05g03912 05 147303138 147304808 ECH
Aip05g03912 05 147303138 147304808 Aip09g04042 09 146723935 146724612 PCT