Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g04039 ATGGGTGAAGTTGAGACCTTTGCATTTCAGGCTGAGATCAACCAGCTTCTCAGCCTCATCATCAACACCTTCTACTCCAACAAGGAGATCTTTCTTCGCGAACTCATCAGCAATGCCTCTGACGCATTGGATAAGATTCGATTCGAGAGCCTCACGGACAAGACCAAGCTGGACGCCAAGCCTGAGCTTTTCATCAGGCTCGTCCCTGACAAGACCAACAAGACCCTCTCCATTATCGACAGCGGCATTGGAATGACCAAAGCAGATTTGGTGAACAATTTGGGCACCATTGCGAGGTCCGGGACGAAGGAATTCATGGAGGCGCTGCAGGCAGGTGCCGATGTCAGCATGATTGGCCAATTCGGTGTTGGTTTCTACTCTGCTTACTTGGTTGCAGAGAAGGTGATTGTCACCACCAAGCACAACGACGATGAGCAATACATTTGGGAATCTCAGGCCGGTGGATCATTCACTGTTACCAGGGATGTCAATGGTGAACCACTTGGAAGGGGTACTAAGATTACCCAGGTAACCAAAAATAGATTAGAATATTTGGAGGAGAGGAGGATTAAGGATCTTGTCAAGAAACACTCGGAGTTCATTAGCTACCCTATCTACCTTTGGACTGAGAAGACAACTGAGAAGGAGATCAGCGACGATGAAGATGACGAGCCTAAGAAGGTGGAGGAAGGAGACGTTGAGGAAGTTGATGAAGAGAAGGAGAAGGACTCCAAGAAGAAGAAGAAGATCAAGGAAGTCTCCCACGAGTGGCAACTCATTAACAAGCAGAAACCTATTTGGCTCCGAAAGCCCGAGGAGATTACCAAGGAGGAGTATGCTTCCTTCTACAAGAGCCTCACCAACGACTGGGAAGACCATTTAGCTGTGAAGCATTTCTCAGTGGAGGGTCAGCTTGAGTTTAAGGCCATTCTATTTGTTCCAAGAAGGGCACCTTTTGATCTGTTTGACACTAGGAAGAAGATGAACAATATGAAGCTCTATGTGAGGAGGGTGTTCATCATGGACAATTGTGAGGAGCTCATCCCTGAGTACCTTGGATTTGTCAAGGGTGTTGTTGACTCTGATGACTTGCCCCTCAACATCTCTCGTGAGATGCTGCAGCAGAACAAGATCTTGAAGGTGATCAGGAAGAATCTAGTGAAGAAGTGCATTGAGATGTTCAATGAAATCGCAGAGAACAAGGAAGACTACAACAGGTTCTATGATGCTTTCTCCAAGAACTTGAAGTTGGGTATCCATGAGGATAGCCATAACAGAGCCAAGCTGGCTGATTTGCTTAGGTACCACTCTACTAAGAGTGGAGATGAGATGACAAGCTTGAAGGATTATGTTACGAGGATGAAGGAAGGTCAGAAGGACATTTACTACATCACTGGAGAGTGCAAGAAGGCTGTTGAGAACTCCCCGTTCTTGGAGAGGCTAAAGAAGAAGGGGTATGAGGTTCTGTTCATGGTGGATGCCATTGACGAGTATGCTGTTGGACAATTGAAGGAGTACGACGGGAAGAAGATGGTGTCTGCTGCAAAGGAAGGATTGAAGCTTGATGAGGACAGCGAGGAAGAGAAGAAGAAAAAAGAGGAGAAGAAGAAGTCCTTTGAGGAGCTCTAA 1629 0.4659 MGEVETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKTKLDAKPELFIRLVPDKTNKTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYIWESQAGGSFTVTRDVNGEPLGRGTKITQVTKNRLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISDDEDDEPKKVEEGDVEEVDEEKEKDSKKKKKIKEVSHEWQLINKQKPIWLRKPEEITKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAILFVPRRAPFDLFDTRKKMNNMKLYVRRVFIMDNCEELIPEYLGFVKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYNRFYDAFSKNLKLGIHEDSHNRAKLADLLRYHSTKSGDEMTSLKDYVTRMKEGQKDIYYITGECKKAVENSPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKMVSAAKEGLKLDEDSEEEKKKKEEKKKSFEEL 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g04039 542 CDD HATPase_Hsp90-like 14 201 - -
Aip09g04039 542 Pfam Hsp90 protein 183 542 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Aip09g04039 542 MobiDBLite consensus disorder prediction 518 542 - -
Aip09g04039 542 PRINTS 90kDa heat shock protein signature 26 48 IPR020575 -
Aip09g04039 542 PRINTS 90kDa heat shock protein signature 75 92 IPR020575 -
Aip09g04039 542 PRINTS 90kDa heat shock protein signature 187 205 IPR020575 -
Aip09g04039 542 PRINTS 90kDa heat shock protein signature 5 25 IPR020575 -
Aip09g04039 542 PRINTS 90kDa heat shock protein signature 118 140 IPR020575 -
Aip09g04039 542 PRINTS 90kDa heat shock protein signature 93 110 IPR020575 -
Aip09g04039 542 MobiDBLite consensus disorder prediction 214 247 - -
Aip09g04039 542 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 4 212 IPR036890 -
Aip09g04039 542 PANTHER HEAT SHOCK PROTEIN 90-1 1 542 - -
Aip09g04039 542 Gene3D - 3 227 IPR036890 -
Aip09g04039 542 SUPERFAMILY Ribosomal protein S5 domain 2-like 262 517 IPR020568 -
Aip09g04039 542 ProSitePatterns Heat shock hsp90 proteins family signature. 25 34 IPR019805 GO:0005524|GO:0006457|GO:0051082
Aip09g04039 542 Gene3D - 261 429 - -
Aip09g04039 542 Coils Coil 516 542 - -
Aip09g04039 542 Hamap Chaperone protein HtpG [htpG]. 2 541 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Aip09g04039 542 Coils Coil 233 253 - -
Aip09g04039 542 MobiDBLite consensus disorder prediction 216 237 - -
Aip09g04039 542 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 175 IPR003594 -
Aip09g04039 542 PIRSF HSP90_HTPG 1 542 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Aip09g04039 542 Gene3D - 430 517 - -
Aip09g04039 542 SMART HKATPase_4 27 165 IPR003594 -
Aip09g04039 542 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 1 542 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g04039 Aip-Chr9 146703467 146705344 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g04039 K04079 - sind:105160433 911.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03909 05 147273371 147276460 Aip09g04039 09 146703467 146705344 ECH
Aip09g04039 09 146703467 146705344 Aip09g04039 09 146703467 146705344 ECH