Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03909 ATGGCGGATGTACAGATGGCAGACGCTGAGACATTCGCATTCCAAGCGGAGATCAACCAATTGCTGAGCCTCATCATCAACACTTTCTACTCCAACAAGGAGATCTTCCTTCGCGAACTCATCAGCAACGCTTCCGACGCATTGGATAAGATCCGATTCGAGAGCTTAACCGATAAGAGCAAGCTCGATGCTCAGCCGGAGCTCTTCATTCGTCTCGTCCCCGACAAGGCCAACAAGACTCTCTCAATCATCGATAGCGGAATTGGAATGACCAAAGCAGATTTGGTGAATAATTTGGGAACAATAGCGAGGTCTGGGACGAAGGAGTTCATGGAGGCGCTGCAGGCGGGTGCTGACGTCAGCATGATTGGACAATTCGGTGTTGGGTTCTACTCTGCATACTTGGTTGCCGAGAAGGTGATTGTGACCACTAAGCATAACGATGATGAGCAGTACATTTGGGAATCCCAGGCTGGTGGCTCATTCACTGTGACCAGGGATACCAGTGGGGAGCAACTCGGAAGAGGAACCAAAATCACCCTCTTCCTCAAGGAGGATCAGCTGGAGTACTTGGAGGAGAGGAGGATTAAGGATCTTGTGAAGAAGCACTCCGAATTCATTAGTTATCCCATTTATCTTTGGACTGAGAAGACGACCGAGAAAGAGATCAGTGATGATGAGGACGATGAACCCAAGAAAGAGGAGGAAGGCGATGTTGAGGAAGTTGATGAAGAGAAGGAAAAGGACTCCAAGAAGAAGAAAAAGATCAAGGAGGTTTCTCACGAATGGCAACTCATCAACAAGCAGAAACCAATCTGGTTGCGCAAGCCGGAAGAGATAACCAAGGAGGAATATGCATCCTTCTACAAGAGCCTCACCAATGATTGGGAAGACCACTTAGCAGTGAAGCATTTCTCAGTCGAAGGCCAGCTTGAATTTAAGGCCATTCTCTTTGTCCCCAAGAGAGCACCCTTTGATCTGTTTGACACAAGGAAGAAGCCAAACAACATCAAGCTTTATGTCAGAAGGGTGTTCATCATGGACAACTGCGAGGAGATCATTCCAGAGTACCTTAGCTTTGTTAAGGGTGTTGTCGACTCCGATGACTTGCCACTCAACATCTCTCGTGAGACGTTGCAGCAGAACAAGATCTTGAAGGTGATCAGGAAGAACATTGTGAAGAAGTGCATTGAGATGTTCAATGAGATTGCTGAGAATAAGGATGATTACAACAAATTCTATGAGGCTTTCTCCAAGAATCTCAAGTTGGGTATCCACGAGGATAGTCAAAACAGAGCCAAATTGGCTGATTTGCTCAGATATCACTCTACAAAGAGTGGAGATGAGATGACAAGTTTGAAGGACTATGTTACTAGAATGAAGGAGGGCCAGAAGGACATTTACTACATCACTGGAGAAAGCAAGAAAGCAGTGGAGAACTCACCCTTCCTGGAGAAGCTCAAGAGAAAGGGATATGAGGTGTTGTTCATGGTGGATGCCATTGATGAATACGCTGTTGGACAATTAAAGGAGTATGAAGGCAAGAAACTGGTTTCAGCTACAAAGGAGGGATTGAAGTTGGATGATGAGACAGAGGAAGAGAAAAAGAAGAAGGAAGAAAAGAAGAAGTCATTTGAGGACCTCTGCAAAGTTATCAAGGATATATTGGGAGACAAAGTTGAGAAGGTTGTGGTTTCTGACAGGATTGTTGATTCACCTTGCTGTTTGGTTACTGGTGAGTATGGTTGGACTGCAAACATGGAGAGGATTATGAAGGCTCAGGCCTTGAGAGATAACAGCATGGCTGGCTACATGTCTAGCAAGAAGACTATGGAGATCAACCCTGACAATGGCATTATGGAAGAACTGAGGAAGAGGGCAGAAGCTGACAAGAATGACAAGTCAGTAAAGGATCTTGTGCTGCTTCTCTTTGAGACCGCTCTTTTGACTTCTGGTTTCAGCCTTGATGATCCAAACACCTTTGCTGCAAGAATCCACAGGATGTTGAAGCTGGGTTTGAGCATCGATGAGGATGAAACTGGTGGGGACGATGCTGACATCCCAGCACTGGAAGAGGATGGTGCCGAGGAAAGTAAGATGGAAGAAGTCGATTAA 2115 0.4582 MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKSKLDAQPELFIRLVPDKANKTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYIWESQAGGSFTVTRDTSGEQLGRGTKITLFLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISDDEDDEPKKEEEGDVEEVDEEKEKDSKKKKKIKEVSHEWQLINKQKPIWLRKPEEITKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEEIIPEYLSFVKGVVDSDDLPLNISRETLQQNKILKVIRKNIVKKCIEMFNEIAENKDDYNKFYEAFSKNLKLGIHEDSQNRAKLADLLRYHSTKSGDEMTSLKDYVTRMKEGQKDIYYITGESKKAVENSPFLEKLKRKGYEVLFMVDAIDEYAVGQLKEYEGKKLVSATKEGLKLDDETEEEKKKKEEKKKSFEDLCKVIKDILGDKVEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFAARIHRMLKLGLSIDEDETGGDDADIPALEEDGAEESKMEEVD 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03909 704 Gene3D - 7 233 IPR036890 -
Aip05g03909 704 MobiDBLite consensus disorder prediction 677 704 - -
Aip05g03909 704 CDD HATPase_Hsp90-like 19 207 - -
Aip05g03909 704 Coils Coil 528 548 - -
Aip05g03909 704 Gene3D - 436 522 - -
Aip05g03909 704 Pfam Hsp90 protein 189 698 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Aip05g03909 704 MobiDBLite consensus disorder prediction 222 243 - -
Aip05g03909 704 Gene3D - 523 674 IPR037196 -
Aip05g03909 704 Gene3D - 267 435 - -
Aip05g03909 704 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 10 218 IPR036890 -
Aip05g03909 704 ProSitePatterns Heat shock hsp90 proteins family signature. 30 39 IPR019805 GO:0005524|GO:0006457|GO:0051082
Aip05g03909 704 PANTHER HEAT SHOCK PROTEIN 90-1 1 703 - -
Aip05g03909 704 PIRSF HSP90_HTPG 1 704 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Aip05g03909 704 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 1 703 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Aip05g03909 704 SUPERFAMILY Ribosomal protein S5 domain 2-like 268 523 IPR020568 -
Aip05g03909 704 Hamap Chaperone protein HtpG [htpG]. 7 670 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Aip05g03909 704 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 186 IPR003594 -
Aip05g03909 704 SMART HKATPase_4 32 187 IPR003594 -
Aip05g03909 704 MobiDBLite consensus disorder prediction 678 704 - -
Aip05g03909 704 PRINTS 90kDa heat shock protein signature 10 30 IPR020575 -
Aip05g03909 704 PRINTS 90kDa heat shock protein signature 31 53 IPR020575 -
Aip05g03909 704 PRINTS 90kDa heat shock protein signature 80 97 IPR020575 -
Aip05g03909 704 PRINTS 90kDa heat shock protein signature 98 115 IPR020575 -
Aip05g03909 704 PRINTS 90kDa heat shock protein signature 123 145 IPR020575 -
Aip05g03909 704 PRINTS 90kDa heat shock protein signature 175 192 IPR020575 -
Aip05g03909 704 PRINTS 90kDa heat shock protein signature 193 211 IPR020575 -
Aip05g03909 704 Coils Coil 232 259 - -
Aip05g03909 704 MobiDBLite consensus disorder prediction 220 253 - -
Aip05g03909 704 SUPERFAMILY HSP90 C-terminal domain 547 669 IPR037196 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03909 Aip-Chr5 147273371 147276460 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03909 K04079 - qsu:112015652 1218.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03909 05 147273371 147276460 Aip09g04039 09 146703467 146705344 ECH
Aip05g03909 05 147273371 147276460 Aip05g03909 05 147273371 147276460 ECH