Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g04034 ATGGCTGACGTCACCAATACCACCCGGGACACCGTCATTGCCGCCGCTTCCGTCATCTTCTCCGCCGAATCCAGACCACAACCTCCCTCTCTTCCGAAAAAACACTGGGGAAGCTGTTGGAGCTCATATTGGTGTTTTGGATCTCATAAAACCAGCAAGAGAATTGGCCATGCTGTCAATGTTCCTGAACCTGTTGCACCATCAGGACAAGCTGCTCCTACTGCACCAAATTCTTCAACTGCCGTAGTAATGCCATTTGCTGTGCCTCCCTCTTCTCCTGCATCTGTTTTCCAATCCAATCCTTCATCTGCTATTCAGTCACCAGCTGGGCCGCTCTCACTCTCCTCTCTATCTGCAAATGCATTTTCTTCTGGTGGACCTGCATCTATCTTTACCATTGGTCCTTATGCCTATGAGACCCAGTTAGTCTCACCACCTGTGTTTTCTAACTTCACAACTGAACCATCTACTGCTTCTTTTACTCCGCCTCCTGAATCTGTGCATCAGACAACACCATCATCCCCTGAGGTTCCATTTGCTCAATTGGTGGCATCTTCTCTAGACCTGGCTCATAAAAACAGTGGTAGAAATCACAAGTTTGCATTGTTCAACTATGATTATCATTCTTATCAGCAATATCCTGGAAGCCCAGGTGGCCAACTCATCTCACCTGGATCAGTGATTTCAACTTCTGGCAGCTCTACCCCTTTCCCTGATAGACACCCAATTCTCGAGTTCCATAAAGAGGAATCATCAAAGTTCTTGAGTTCTGAACACTTCACAGGTCGTAAATGGAGTTCGAGACTTGGATCTGGATCCTTGACACCAGATGGTGCCGGGCAGAGTTCAAGACTAGGTTCAGGATCCGCGACACCAGATGTTGCAGGGCATGGTTCAAGACTAGGTTCGGGATCTTTGACACCAAATGTTACAGGACATGGTTCAAGACTAGATTCACAGCTTGGCTCTGGGTGTTTGACACCTGATGGGACGGGTTCAAATTCAAGGTTGAGTTCTGGCTCTCTGACACCTGTTCAGCTAGCTTCACAGCAGATTTCTGAGGCATCATCCCTTGCTAACTCAGGGAATGGGTGCCAAACTAATCCAGCAATTGTTGATCATAGAGTTTCATTTGAATTTACTGGGGAAGATGTTGCACGTTGTCTTGCAAATAAAGCAGGATCATTGCTGCGAAACACATCACAGTCTTCGCAAGGTATAGTGGGTGAGCACCCTGTTGACAAAGAAAGGATGCAAATAGACTCCAATACTTGTGCTTTATGTTCAGGGAAACCTTCAGATGATCAGACAGTCAATGCTCCGGGAGAAGGAGAGGAGCGTCGCTGTGAAAAGCATAACTCCTCTAATTCTTCCAAAGAGTTCAATTTTGACAGCAGAAAAGGGGTTACTGATGTTGTTGCCAGTGGCTCTGATTGGTGGACTAACAAGAAGGTTGCTGGAAAGGAAGGTAGATCAAGCAACAGTTGGGCTTTCTTTCCAATGCTGCAGCCAGAAAACAACTGA 1524 0.4659 MADVTNTTRDTVIAAASVIFSAESRPQPPSLPKKHWGSCWSSYWCFGSHKTSKRIGHAVNVPEPVAPSGQAAPTAPNSSTAVVMPFAVPPSSPASVFQSNPSSAIQSPAGPLSLSSLSANAFSSGGPASIFTIGPYAYETQLVSPPVFSNFTTEPSTASFTPPPESVHQTTPSSPEVPFAQLVASSLDLAHKNSGRNHKFALFNYDYHSYQQYPGSPGGQLISPGSVISTSGSSTPFPDRHPILEFHKEESSKFLSSEHFTGRKWSSRLGSGSLTPDGAGQSSRLGSGSATPDVAGHGSRLGSGSLTPNVTGHGSRLDSQLGSGCLTPDGTGSNSRLSSGSLTPVQLASQQISEASSLANSGNGCQTNPAIVDHRVSFEFTGEDVARCLANKAGSLLRNTSQSSQGIVGEHPVDKERMQIDSNTCALCSGKPSDDQTVNAPGEGEERRCEKHNSSNSSKEFNFDSRKGVTDVVASGSDWWTNKKVAGKEGRSSNSWAFFPMLQPENN 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g04034 507 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 2 505 IPR040420 -
Aip09g04034 507 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 2 505 - -
Aip09g04034 507 MobiDBLite consensus disorder prediction 440 457 - -
Aip09g04034 507 MobiDBLite consensus disorder prediction 265 346 - -
Aip09g04034 507 MobiDBLite consensus disorder prediction 431 467 - -
Aip09g04034 507 MobiDBLite consensus disorder prediction 216 241 - -
Aip09g04034 507 MobiDBLite consensus disorder prediction 265 289 - -
Aip09g04034 507 MobiDBLite consensus disorder prediction 302 346 - -
Aip09g04034 507 MobiDBLite consensus disorder prediction 153 175 - -
Aip09g04034 507 MobiDBLite consensus disorder prediction 216 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g04034 Aip-Chr9 146662354 146666388 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g04034 - - gmx:100806399 604.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03879 05 146969271 146972756 Aip09g04034 09 146662354 146666388 ECH
Aip09g04034 09 146662354 146666388 Aip09g04034 09 146662354 146666388 ECH
Aip05g03879 05 146969271 146972756 Aip09g04034 09 146662354 146666388 PCT