Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03879 ATGCTCTTCTTTAAGAAAAACAACATAAAATTCCAATCCAGAGTCCAACCAACTACCATACCGAAAAAACGTTGGGGAAGCTGGTGGAGCCTGTATTGGTGTTTTGGATCTACTCATAAAAGCAACAAGCGGATTGGTCATGCTGTCCTTGTTCCTGAACCTGTTGCACCAGCAGGTCCAGCTGCTACTGTGCCGCCAAATCCTTCAACCACCATTGTAATGCCATTCATTGTCCCTCCATCTTCTCCTGCATCTTTTCTCCAATCTGATCCACCTTCCGCTACTCATTCGCCGGCTGGATTGCTCTCTCTCACAGTCAATTCTTACTCATCTGGTGGACCTGCATCCATTTTTACCATAGGTCCTTATGCCTACGAGACACAATTAGTTTCACCCCCTGTATTTTCAAATTTTACAACCGAACCATCAACTGCTTCTTTTACTCCCCCACCTGAATCAGTGCAGATGACAACACCATCATCTCCTGAGGTTCCATTTGCTCAGTTGTTAGCGTCGTCACTCGACCGGGCTCGTAAAAATAATGGGATTCAAAAGTTTGCATTACACAATTATGAATTTCAGCCTTATCAACAACATCCTGGGAGCCCAGGTGGCCAACTCATATCACCTGGATCAGCAATTTCAACATCCGGAACCTGTACTCCTTACCCCGAGAAACGCCCAACTCTTGAGTTCTACAAGGGAGAATCACCAAGGATATTGGGCTTTGAACACTTCTCTTCTCGAAAATGGAGTTCAAGGGTGGGTTCTGGATCCTTGACACCAGATGGTACAGGGCAAGGTTCAAGATTAGGTTCGGGATCTTTGACACCTGATGGTGCGGGTCTGGCCTCAAGACTTGGATCTGGATGTGCAACACCTGATGGTTTGGGGCAGGATTCAAGGTTGGGTTCTGGCTCTTTGACCCCTGATAGTGCTGGACCAACCACTAAATGCAGCATCTATGTGCAAAACCAGATTTCCGAGGTAGCATCCCTTGCAAACTCAGAGAATGTACATCAAAGTAATGCACCATTAGTCGATCACAGAGTCTCATTCGAACTAACCGGGGAAGAAATCGCAAGATGCCTTGCCAATAAAACAGGTGCATTGCTTCGAAACGTGTCTCAGTCTTCACAGGGTATACTAGCCAAAGAAACCATTGACAGAGAAAGCATACAAAAAGACAGCATTAGTTGTTGTGATGTGTGTTCAGGGAAAACGAACTATAACCCCAACAGTCCTCTAGGAGAAGAACGGCAGTGCTGTCAGAAGCATCAATCCGTTAATTCTTCCAAAGAATTCAATTTTGACAACAGGAAAGGTGATGTTTCTGCTAATGCTGCCAAGGAAGGTAGATCAGCCAACAGCTGGGCTTTCTTCCCACTGTTACAACCAGAAATCTGA 1407 0.4556 MLFFKKNNIKFQSRVQPTTIPKKRWGSWWSLYWCFGSTHKSNKRIGHAVLVPEPVAPAGPAATVPPNPSTTIVMPFIVPPSSPASFLQSDPPSATHSPAGLLSLTVNSYSSGGPASIFTIGPYAYETQLVSPPVFSNFTTEPSTASFTPPPESVQMTTPSSPEVPFAQLLASSLDRARKNNGIQKFALHNYEFQPYQQHPGSPGGQLISPGSAISTSGTCTPYPEKRPTLEFYKGESPRILGFEHFSSRKWSSRVGSGSLTPDGTGQGSRLGSGSLTPDGAGLASRLGSGCATPDGLGQDSRLGSGSLTPDSAGPTTKCSIYVQNQISEVASLANSENVHQSNAPLVDHRVSFELTGEEIARCLANKTGALLRNVSQSSQGILAKETIDRESIQKDSISCCDVCSGKTNYNPNSPLGEERQCCQKHQSVNSSKEFNFDNRKGDVSANAAKEGRSANSWAFFPLLQPEI 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03879 468 MobiDBLite consensus disorder prediction 198 221 - -
Aip05g03879 468 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 12 467 - -
Aip05g03879 468 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 12 467 IPR040420 -
Aip05g03879 468 MobiDBLite consensus disorder prediction 252 315 - -
Aip05g03879 468 MobiDBLite consensus disorder prediction 141 162 - -
Aip05g03879 468 MobiDBLite consensus disorder prediction 300 315 - -
Aip05g03879 468 MobiDBLite consensus disorder prediction 252 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03879 Aip-Chr5 146969271 146972756 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03879 - - gmx:100806399 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03879 05 146969271 146972756 Aip09g04034 09 146662354 146666388 ECH
Aip05g03879 05 146969271 146972756 Aip05g03879 05 146969271 146972756 ECH
Aip05g03879 05 146969271 146972756 Aip09g04034 09 146662354 146666388 PCT