Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g04026 ATGTCAATTGTATGTGGCATACCTCTTGTTGAGTGTGTTTACTGTCTGGCTTGTGCCCGTTGGGCTTGGAAACGATGTCTTCATACTGCAGGCCATGACAGCGAGACTTGGGGCCTTGCCACAGCAGAAGAATTTGAGCCTGTCCCTCGCCTTTGTCGCTATATTTTGGCCGTGTATGAAGATGATCTTCGGAACCCTCTTTGGGCACCTCCTGGTGGCTATGGAATCAACCCTGACTGGTTGGTACTCAGAAAGACATATGAAGATACACAAGGGCGTGCACCGCCCTATATGCTGTATCTTGATCATGATCATGCTGATATAGTACTAGCCTTTAGGGGTCTGAATTTGGCAAAGGAGAGTGACTATGCAGTTCTGTTGGATAATAGATTGGGGCAGAGGAAATTCGATGGGGGATATGTTCACAATGGGCTGCTGAAGGCGGCCGGATGGGTTTTGGATGCTGAATGTGAAGTTTTAAGGGAATTGGTGGAAAAGCATCCAAATTACACTCTGACTTTTGCTGGACACTCCCTTGGATCAGGAGTAGCAGCAATGTTGAGCATGGTGGTGGTGCAGAATCGGGATAGACTTGGAAATATCGAGAGGAAGAGGGTCAGGTGCTATGCTATTGCACCTGCTAGATGTATGTCTCTAAACTTGGCAGTAAGATATGCAGATGTCATCAACTCTGTTGTGCTTCAGGATGACTTCTTACCAAGGACAGCCACTCCATTGGAAGATATATTCAAGTCTCTTTTCTGTTTACCATGCATATTGTGCTTGAGGTGCATGAGAGATACATGTATACCAGAGGAAACGATGTTGAAAGATCCAAGGAGACTATATGCACCTGGTCGCCTTTACCACATTGTCGAGAGAAAGCCTTTTAGACTGGGAAGGTTTCCCCCAGTTGTGAGGACAGCAGTGCCTGTAGATGGAAGGTTTGAGCATATAGTCCTTTCTTGTAATGCTACATCAGATCATGCCATCATTTGGATAGAGAAAGAAGCACAAAGAGCTCTTGATTTGATGCGGGAAAAAGATAACACGATGCAAATACCTGCAAAGCAAATGATGGAGCGGCAAGAAACTTTAACTAGACACAGTCAAGAATACAAAGCAGCATTACAAAGAGCTAAGACATTAGATGTTCCTCATGCTTCTACACCACCATCACAATATGGTACTTTTGAAGAGGAGGGAGAGGAGAGTTCAAGAAGGTCACAGGGTGAGTCTTCTTTTGGCTCGACTAATAGGAGTACAGTGGATGAAAGCTGGGAAGAATTAATTGAGCGTCTTTTCGATAAGGATGAGCATGGCCACATTGTACTCAAGAAACAATGA 1347 0.4484 MSIVCGIPLVECVYCLACARWAWKRCLHTAGHDSETWGLATAEEFEPVPRLCRYILAVYEDDLRNPLWAPPGGYGINPDWLVLRKTYEDTQGRAPPYMLYLDHDHADIVLAFRGLNLAKESDYAVLLDNRLGQRKFDGGYVHNGLLKAAGWVLDAECEVLRELVEKHPNYTLTFAGHSLGSGVAAMLSMVVVQNRDRLGNIERKRVRCYAIAPARCMSLNLAVRYADVINSVVLQDDFLPRTATPLEDIFKSLFCLPCILCLRCMRDTCIPEETMLKDPRRLYAPGRLYHIVERKPFRLGRFPPVVRTAVPVDGRFEHIVLSCNATSDHAIIWIEKEAQRALDLMREKDNTMQIPAKQMMERQETLTRHSQEYKAALQRAKTLDVPHASTPPSQYGTFEEEGEESSRRSQGESSFGSTNRSTVDESWEELIERLFDKDEHGHIVLKKQ 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g04026 448 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 447 - -
Aip09g04026 448 Gene3D alpha/beta hydrolase 38 252 IPR029058 -
Aip09g04026 448 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 447 - -
Aip09g04026 448 SUPERFAMILY alpha/beta-Hydrolases 43 271 IPR029058 -
Aip09g04026 448 CDD Lipase_3 44 241 - -
Aip09g04026 448 MobiDBLite consensus disorder prediction 409 424 - -
Aip09g04026 448 Pfam Lipase 3 N-terminal region 9 74 IPR005592 GO:0016042
Aip09g04026 448 MobiDBLite consensus disorder prediction 378 424 - -
Aip09g04026 448 Pfam Lipase (class 3) 109 243 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g04026 Aip-Chr9 146604869 146608418 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g04026 1 448 Miscellaneous Gene Families AT3G49050 71.008 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g04026 - - mtr:MTR_1g100950 843.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03870 05 146910058 146912249 Aip09g04026 09 146604869 146608418 ECH
Aip09g04026 09 146604869 146608418 Aip09g04026 09 146604869 146608418 ECH