Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03870 ATGTCAATCCTCTGTGGCCTTCCTCTTCTTGAGTGTGTGTATTGTCTCGCTTGCGCTCGCTGGGCTTGGAAAAGATGTCTTCACAATGCAGGCCATGACAGTGAGAATTGGGGATTTGCCAACGCCGAAGAGTTCGAGCCGGTGCCTCGCCTTTGCAGATACATCCTAGCTGTGTATGAAGATGATCTTAGACACCCCCTTTGGGCACCTCCTGGTGGTTATGGAATCAACCCAGATTGGCTAATACACAAGAAGACATACGAAGATACTCGCGGATGCGCTCCACCCTATATATTGTATATTGATCATGATCATGCTGATATAGTTCTTGCCATCAGGGGCCTAAACTTGGCAAAAGAGAGTGACTATGCAGTTCTTTTGGATAATAGATTGGGGAAGAGGAAATTTGATGGAGGGTATGTTCACAATGGGCTATTGAAAGCTGCTGGATGGATTTTGGACACAGAATGCGAGGTTCTGAGGGAGTTGGTGGAAACATATCCAGATTACAGACTTACTTTTGCTGGACATTCACTTGGATCAGGAGTTGCAGCTATGTTGACCATGGTGGTGGTGCAGAATCGCGATAAGCTTGGAGATATTGACAGGAAGAGAGTCAGGTGCTATGCCATCGCGCCGGCTAGGTGTATGTCGCTAAATTTGGCGGTGCGATATGCAGATGTCATCAACTCTGTTGTGTTGCAGGCAAGTATCAGAATCTCAAATGATGACTTCTTACCAAGGACAGCCACCCCATTGGAAGATATATTCAAATCTGTTTTCTGTTTGCCATGCCTATTGTGTTTGAGGTGCATGAGAGATACATGCATATCTGAGGAGAAGCTGCTCAAAGATCCAAGGAGACTCTATGCCCCTGGTCGCCTTTATCACATTGTTGAGAGAAAGCCCTTTAGAATGGGAAGGTTTCCCCCGGTTGTAAGGACGGCGGTGCCTGTCGACGGAAGATTCGAGCATATAATCCTTTCATGTAACGCCACGTCTGATCATGCCATAATTTGGATAGAGAAAGAAGCACAAAAGGCTCTAGATTTAATAATAGAGAAAGACCATGATGCCATGGAAATCCCTGAGAAACAAAAGATGGTGCGTCAAGAAACATTAACTAGGCACAAAGAAGAACACAGAGCAGCACTACAGAGGGCTAAGACATTAGATGTTCCTCATGCTTATACACCACCATCAGAATATGGCACTTTTGATGATGAGAAAGAAGAAGAAGAAGAAGAAGAAAAGAGCTCAAGAAGAAGATTAAAGGGTGGTTCTTCTTCTTTTGGTTCAACTCCTAATAAAACCAATAATGCTAGTGAAAGCTGGGATGAGTTAATTGAACGCCTTTTTGATAAGGATGAGCATGGCCACATGGTGCTGAAGAAATAA 1398 0.4435 MSILCGLPLLECVYCLACARWAWKRCLHNAGHDSENWGFANAEEFEPVPRLCRYILAVYEDDLRHPLWAPPGGYGINPDWLIHKKTYEDTRGCAPPYILYIDHDHADIVLAIRGLNLAKESDYAVLLDNRLGKRKFDGGYVHNGLLKAAGWILDTECEVLRELVETYPDYRLTFAGHSLGSGVAAMLTMVVVQNRDKLGDIDRKRVRCYAIAPARCMSLNLAVRYADVINSVVLQASIRISNDDFLPRTATPLEDIFKSVFCLPCLLCLRCMRDTCISEEKLLKDPRRLYAPGRLYHIVERKPFRMGRFPPVVRTAVPVDGRFEHIILSCNATSDHAIIWIEKEAQKALDLIIEKDHDAMEIPEKQKMVRQETLTRHKEEHRAALQRAKTLDVPHAYTPPSEYGTFDDEKEEEEEEEKSSRRRLKGGSSSFGSTPNKTNNASESWDELIERLFDKDEHGHMVLKK 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03870 465 SUPERFAMILY alpha/beta-Hydrolases 41 279 IPR029058 -
Aip05g03870 465 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 465 - -
Aip05g03870 465 MobiDBLite consensus disorder prediction 425 444 - -
Aip05g03870 465 Gene3D alpha/beta hydrolase 39 255 IPR029058 -
Aip05g03870 465 MobiDBLite consensus disorder prediction 387 444 - -
Aip05g03870 465 Pfam Lipase (class 3) 109 250 IPR002921 GO:0006629
Aip05g03870 465 CDD Lipase_3 44 248 - -
Aip05g03870 465 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 465 - -
Aip05g03870 465 Pfam Lipase 3 N-terminal region 9 74 IPR005592 GO:0016042
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03870 Aip-Chr5 146910058 146912249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03870 1 465 Miscellaneous Gene Families AT3G49050 69.583 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03870 - - gmx:100776475 774.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03870 05 146910058 146912249 Aip09g04026 09 146604869 146608418 ECH
Aip05g03870 05 146910058 146912249 Aip05g03870 05 146910058 146912249 ECH