Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g04016 ATGGCGAACGCGGCATCTGGAATGGCTGTTAATGATGCATGTAAATTGAAGTTTCTGGAGTTAAAGGCAAAGAGGAATTACCGATTCATTGTGTTCAGGATTGAGAACCAAGAAGTGGTGGTGGAGAAAGTCGGAAGCCCCGACGAAACCTATGATGACTTCACTGCTTCTCTACCTGCTAATGAGTGCCGATATGCTGTCTTTGATTTCGATTTCACTACGGACGAGAACTGTCAGAAAAGCAAAATTTTCTTCATTGCATGGGCACCGGATACATCAAGAGTGAGAGAAAAGATGGTGTATGCGAGCTCCAAGGATAGATTCAAGAGGGAACTCGATGGCATTCAAGTTGAATTGCAAGCAACGGATCCAAGTGAGATGAGCTTTGACATCATAAAAGCCCGGGCAATATAA 414 0.4396 MANAASGMAVNDACKLKFLELKAKRNYRFIVFRIENQEVVVEKVGSPDETYDDFTASLPANECRYAVFDFDFTTDENCQKSKIFFIAWAPDTSRVREKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAI 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g04016 137 Gene3D Severin 1 137 IPR029006 -
Aip09g04016 137 PANTHER COFILIN-RELATED 2 137 IPR017904 GO:0015629|GO:0030042
Aip09g04016 137 SUPERFAMILY Actin depolymerizing proteins 3 135 - -
Aip09g04016 137 PANTHER COFILIN/ACTIN-DEPOLYMERIZING FACTOR-LIKE PROTEIN 2 137 - -
Aip09g04016 137 ProSiteProfiles ADF-H domain profile. 7 137 IPR002108 GO:0003779
Aip09g04016 137 CDD ADF_cofilin_like 6 136 IPR017904 GO:0015629|GO:0030042
Aip09g04016 137 Pfam Cofilin/tropomyosin-type actin-binding protein 14 134 IPR002108 GO:0003779
Aip09g04016 137 SMART adf_2 12 137 IPR002108 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g04016 Aip-Chr9 146505079 146506334 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g04016 K05765 - ahf:112779196 275.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03856 05 146773276 146775572 Aip09g04016 09 146505079 146506334 ECH
Aip09g04016 09 146505079 146506334 Aip09g04016 09 146505079 146506334 ECH