Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03856 ATGGCGAACGCGGCGTCAGGAATGGCAGTTAGCGATGAATGTAAATTGAAATTCTTGGAGTTGAAAGCAAAGAGGAATTCCCGTTTCATTGTATTCAAGATTGTGGATCAAGCAGTGGTGGTGGACTCCATTGGAGGCCCACAAAATACTTACGATGATTTCACGAAGGCTCTGCCTCCAAATGAGTGTCGTTATGCTGTCTTTGATTTTGATTTCACCACTCATGAGAATTGCCAAAGAAGCAAGATTTTCTTCATTGCCTGGTCTCCAGATTCAGCAAAGGTGAGACAAAAAATGGTGTATGCGAGCTCCAAAGACAGGTTCAAGAGAGAACTTGATGGTATTCAGGTTGAGTTGCAAGTAACAGATCCTAGTGAAATGAGCATGGACATCATAAAAGCTAGGGCATACTAA 414 0.4251 MANAASGMAVSDECKLKFLELKAKRNSRFIVFKIVDQAVVVDSIGGPQNTYDDFTKALPPNECRYAVFDFDFTTHENCQRSKIFFIAWSPDSAKVRQKMVYASSKDRFKRELDGIQVELQVTDPSEMSMDIIKARAY 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03856 137 SUPERFAMILY Actin depolymerizing proteins 2 135 - -
Aip05g03856 137 PANTHER COFILIN-RELATED 2 136 IPR017904 GO:0015629|GO:0030042
Aip05g03856 137 PANTHER COFILIN/ACTIN-DEPOLYMERIZING FACTOR-LIKE PROTEIN 2 136 - -
Aip05g03856 137 SMART adf_2 12 137 IPR002108 GO:0003779
Aip05g03856 137 CDD ADF_cofilin_like 6 136 IPR017904 GO:0015629|GO:0030042
Aip05g03856 137 ProSiteProfiles ADF-H domain profile. 7 137 IPR002108 GO:0003779
Aip05g03856 137 Pfam Cofilin/tropomyosin-type actin-binding protein 14 134 IPR002108 GO:0003779
Aip05g03856 137 Gene3D Severin 1 137 IPR029006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03856 Aip-Chr5 146773276 146775572 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03856 K05765 - cpep:111810346 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03856 05 146773276 146775572 Aip09g04016 09 146505079 146506334 ECH
Aip05g03856 05 146773276 146775572 Aip05g03856 05 146773276 146775572 ECH