Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03994 ATGAGTAGTATGGGAGGGAGAGATCTTGAGAGTGGTGGAACCAAGAACACTTCTAGAGCTCCACCACAAGCAGCAGCAGTTTCTTCTTCTTCTTCATATGCTTATGATACAGAGACTCATTGGACATCATGGCTTGTGCCCATGTTTGTGGTTGCAAATATTGCTGTTTTCATCGTTGCCATGTACATCAACGATTGCCCCAAGAACAACATAGGACTCCAGGGTAATTGTGTCGCCAGGTTCCTTGGCAGGTTCTCTTTTCAGCCTCTTAGGGAGAATCCACTGCTTGGCCCTTCTTCTTCAACGTTGAGAAAGATGGGAGGTCTTGAGTGGGATAATGTTGTGAATAAGCATCAGGCATGGAGACTTGTCACTTGCATTTGGTTACATGCTGGAATTATTCATTTGCTAGCAAACATGTTGAGTCTGGTCTTCATTGGTATTCGCCTTGAGCAGCAATTTGGATTTGTGAGAATAGGAATCATATATCTAGTGTCTGGATTTGGGGGGAGTGTGCTGTCTACTCTGTTCATTAGAAACAACATTTCTGTTGGTGCATCTGGTGCTCTCTTTGGACTACTTGGAGCAATGCTTTCGGAACTTTTCACAAACTGGACCATCTATTCAAATAAAGTGAGAGTCTTCATCATGCTAATTTGA 660 0.4318 MSSMGGRDLESGGTKNTSRAPPQAAAVSSSSSYAYDTETHWTSWLVPMFVVANIAVFIVAMYINDCPKNNIGLQGNCVARFLGRFSFQPLRENPLLGPSSSTLRKMGGLEWDNVVNKHQAWRLVTCIWLHAGIIHLLANMLSLVFIGIRLEQQFGFVRIGIIYLVSGFGGSVLSTLFIRNNISVGASGALFGLLGAMLSELFTNWTIYSNKVRVFIMLI 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03994 219 MobiDBLite consensus disorder prediction 1 24 - -
Aip09g03994 219 PANTHER RHOMBOID-RELATED 4 218 IPR002610 GO:0004252|GO:0006508|GO:0016021
Aip09g03994 219 SUPERFAMILY Rhomboid-like 41 218 IPR035952 -
Aip09g03994 219 Pfam Rhomboid family 115 217 IPR022764 GO:0004252|GO:0016021
Aip09g03994 219 PANTHER RHOMBOID-LIKE PROTEIN 4 218 - -
Aip09g03994 219 Gene3D - 42 219 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03994 Aip-Chr9 146369958 146372081 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03994 - - gmx:100809265 327.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03799 05 146246904 146254692 Aip09g03994 09 146369958 146372081 ECH
Aip09g03994 09 146369958 146372081 Aip09g03994 09 146369958 146372081 ECH