Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03970 ATGGCCCAGTTTACCCCCTCAGGTAAATCTGGTGATTTGAAACAAGAAGATGACAAGAAAACAAGTGAACTAGTTGTTTGCTTGGGTGAACTGTTAATAGACTTTGTACCAACGGTGGGTGGAGTGTCACTAGCTGAAGCACCTGCTTTCAAGAAAGCTCCTGGTGGTGCTCCTGCCAATGTAGCAGTTGGCATCTCAAGGCTTGGTGGTTCATCTGCTTTCATAGGCAAGGTAGGAAAGGATGAATTCGGGTATATGTTATGTGATATTTTAAAGCAGAACTTTGTTGATACATCTGGCGTGCGGTTTGACTCTGAAGCTAGAACTGCATTAGCTTTTGTCACGCTTAGAGCCGATGGCGAGCGCGAGTTCTTGTTTTTCCGGAACCCTAGTGCTGATATGCTTCTTCATGAGTCAGAGATTGACAAAAATCTCATACAGAAGGCTAAAATATTCCATTATGGTTCCATTAGCTTGATTCATGATCCATGCAAGTCAGCTCATCTTGCCGCCTTGCGAATCGCTAAAGAATCTGGTTGTATTCTCTCATATGATCCAAATTTGAGATTGGCGCTATGGCCATCAGCTGAGGCTGCTCAGAAAGGCATAATGAGTGTATGGGACAAAGCTGATATCATAAAGATAAGCGAGGAGGAGATTACGTTTTTGACAGAGGGTGATGATCCTAACGATGATGATGTTGTATTAAAGAAGCTTTTTCACCCTAATCTCAAGCTATTAATTGTGACACAAGGCTCAGAGGGTTGTAGATATTACACCAAGAAATTCAAAGGCCGGGTGGCAGGTGTTAAAGTTAACCCCATTGACACAACTGGGGCCGGTGATGCATTTGTTAGTGGGATTCTCTACAACATAGCTTCAGATCAAAGCATTTTACAGGAGGAGGAGCAACTCCGGAAAGCGCTACGATTTGCCAACATATGTGGTGCCATCACTGTGACAAAGAGAGGTGCAATTCCCGCACTACCTAACAAAGAAGCTGTTGCGCAGTTCATGTTAGAAGCAACTACAATATAG 1038 0.4355 MAQFTPSGKSGDLKQEDDKKTSELVVCLGELLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFIGKVGKDEFGYMLCDILKQNFVDTSGVRFDSEARTALAFVTLRADGEREFLFFRNPSADMLLHESEIDKNLIQKAKIFHYGSISLIHDPCKSAHLAALRIAKESGCILSYDPNLRLALWPSAEAAQKGIMSVWDKADIIKISEEEITFLTEGDDPNDDDVVLKKLFHPNLKLLIVTQGSEGCRYYTKKFKGRVAGVKVNPIDTTGAGDAFVSGILYNIASDQSILQEEEQLRKALRFANICGAITVTKRGAIPALPNKEAVAQFMLEATTI 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03970 345 CDD bac_FRK 24 326 - -
Aip09g03970 345 PANTHER FRUCTOKINASE-7-RELATED 16 341 - -
Aip09g03970 345 PANTHER HEXOKINASE FAMILY MEMBER 16 341 - -
Aip09g03970 345 PRINTS Ribokinase signature 50 69 IPR002139 GO:0016301
Aip09g03970 345 PRINTS Ribokinase signature 205 220 IPR002139 GO:0016301
Aip09g03970 345 PRINTS Ribokinase signature 247 258 IPR002139 GO:0016301
Aip09g03970 345 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 276 289 IPR002173 GO:0016773
Aip09g03970 345 Pfam pfkB family carbohydrate kinase 23 331 IPR011611 -
Aip09g03970 345 Gene3D - 20 344 IPR029056 -
Aip09g03970 345 SUPERFAMILY Ribokinase-like 25 339 IPR029056 -
Aip09g03970 345 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 55 79 IPR002173 GO:0016773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03970 Aip-Chr9 146143344 146145813 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03970 K00847 - gmx:100818404 556.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03742 05 145507276 145511248 Aip09g03970 09 146143344 146145813 ECH
Aip09g03970 09 146143344 146145813 Aip09g03970 09 146143344 146145813 ECH
Aip05g03742 05 145507276 145511248 Aip09g03970 09 146143344 146145813 PCT