Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03742 ATGCAACACTCTGCAAATCAAATGGCCAATTCTTACTCAGGTAATTCCAATCATATCCCAAAAGAAGACGCAAAGGAAACAAGTTCGCTGGTTGTTTCCTTTGGGGAACTGCTGATAGACTTTGTGCCAACAGTGGGAGGAGTGTCGCTGGCCGAAGCACCGGCTTTTCAGAAAGCTCCCGGTGGAGCTCCTGCCAATGTAGCTGTTGGTATATCTAGACTTGGAGGTTCATCGGCTTTCGTCGGAAAGGTTGGAGCAGACGAGTTCGGTTACATGTTGGCCAATATATTGAAGGAAAACAATGTTGACATGTCTGGCATGCGGTTTGACCCGAATGCTAGAACTGCATTAGCTTTTGTTACACTTAGAGCTGACGGTGAACGAGAATTCTTGTTTTTCCGGAATCCAAGTGCTGATATGCTTCTTCATGAATCAGAACTTGATATAAATCTCTTAAAGAAGGCTAGAGTCTTCCATTATGGCTCCATCAGCTTGATTGACGAGCCGTGCAAGTCCGCTCATCTTGCTGCTATGAGAATTGCCAGCAATTCTGGTAGTATTCTCTCTTATGATCCAAATTTGAGATTAGCACTATGGCCATCAGCCGAGGCTGCTCGCAAGGGCATAATGAGTATTTGGGATCAAGCCGATGTCATAAAGATAAGTGAGGAAGAGATTACATTTTTGACGGGTGGTGATGATCCTTATGATGATAATGTTGTATTGACGAAACTTTTTCATCCAAATCTCAAACTTCTAATTGTTACTGAAGGCTCATCTGGTTGTAGATATTACACCAAGGAATTCAGGGGCAAAGTTGGAGGTGTTAAAGTCAAACCTGTTGACACAACTGGTGCCGGTGATGCATTTGTCGGTGGATTTCTCTACAACTTGGCTTCTGACCCAAGTATTCTTCAGGATGAGAAACGGCTGCGAAAAGCTCTATATTTCGCAAATGTATGCGGCGCCATCACTGTGACTGAGAGAGGTGCCATTCCTGCAATGCCTACAAAGGAAGCTATCTTGCAATTCTTACTAGAATCTGCTTCAATATAG 1056 0.4375 MQHSANQMANSYSGNSNHIPKEDAKETSSLVVSFGELLIDFVPTVGGVSLAEAPAFQKAPGGAPANVAVGISRLGGSSAFVGKVGADEFGYMLANILKENNVDMSGMRFDPNARTALAFVTLRADGEREFLFFRNPSADMLLHESELDINLLKKARVFHYGSISLIDEPCKSAHLAAMRIASNSGSILSYDPNLRLALWPSAEAARKGIMSIWDQADVIKISEEEITFLTGGDDPYDDNVVLTKLFHPNLKLLIVTEGSSGCRYYTKEFRGKVGGVKVKPVDTTGAGDAFVGGFLYNLASDPSILQDEKRLRKALYFANVCGAITVTERGAIPAMPTKEAILQFLLESASI 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03742 351 CDD bac_FRK 30 332 - -
Aip05g03742 351 PANTHER FRUCTOKINASE-7-RELATED 21 347 - -
Aip05g03742 351 Gene3D - 27 350 IPR029056 -
Aip05g03742 351 Pfam pfkB family carbohydrate kinase 30 337 IPR011611 -
Aip05g03742 351 MobiDBLite consensus disorder prediction 1 21 - -
Aip05g03742 351 PRINTS Ribokinase signature 56 75 IPR002139 GO:0016301
Aip05g03742 351 PRINTS Ribokinase signature 211 226 IPR002139 GO:0016301
Aip05g03742 351 PRINTS Ribokinase signature 253 264 IPR002139 GO:0016301
Aip05g03742 351 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 282 295 IPR002173 GO:0016773
Aip05g03742 351 SUPERFAMILY Ribokinase-like 31 345 IPR029056 -
Aip05g03742 351 MobiDBLite consensus disorder prediction 1 18 - -
Aip05g03742 351 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 61 85 IPR002173 GO:0016773
Aip05g03742 351 PANTHER HEXOKINASE FAMILY MEMBER 21 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03742 Aip-Chr5 145507276 145511248 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03742 K00847 - gmx:100778752 568.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03742 05 145507276 145511248 Aip09g03970 09 146143344 146145813 ECH
Aip05g03742 05 145507276 145511248 Aip05g03742 05 145507276 145511248 ECH
Aip05g03742 05 145507276 145511248 Aip09g03970 09 146143344 146145813 PCT