Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03967 ATGGTTAATGCAATGGCAATAGACTGCATGCACTCCATGCCTCAACCACCAAAAGAATCCTCATTGGTGTTTGAAGCCTCCGTTTTCAGCCACCAACTCAACCTACCGTCACAATTCATTTGGCCTGACCACGAGAAAGCCTCCATCCATGTCCCTGAGCTTCAGGTCCCATTCATTGATCTCGGAGGGTTCCTTTCCGGCGATCCCCTCGCCGCAATGGAAGCCTCAAGCCTTGTTGGCGAAGCATGCCGGAAGCACGGCTTCTTCCTTGTCGTCAACCACGGCATAGACAGGAACTTGATCACCGATGCTCACGCTTTGATGGATGATTTCTTTGAGCTTCCCCTGTCCCAGAAACAGAGAGCTCAGAGGAAAACAGGGGAGCACTGTGGTTATGCTAGTAGCTTCACCGGTAGATTTTCTTCTAAGCTTCCATGGAAGGAGACACTTTCCTTTCAATACTCGGCAGATAAAAAACACTCACCCAACCTTGTCAAGGACTACCTTTGCAGTAAACTGGGCAAAGAGTTTGAGCAATTCGGGAATGTGTATGAGAAGTACTGTGAGGCAATGAGCAATCTTTCTTTGGGGATAATGGAGCTTCTAGGGATGAGCCTTGGAGTTGGCAAATCGTATTTTAGAGAGTTCTTTGAAGAGAACAATTCAATAATGAGGCTCAATTACTACCCTCCTTGTCAAAAACCTGACCTCGCCTTGGGAACTGGACCTCATTGTGATCCAACATCCTTAACCATTCTCCACCAGGACCAAGTTGGTGGCCTCCAAGTTTATGTTGACGATCAGTGGCACTCAGTTACCCCGAATTTCAATGCTTTTGTCGTCAATATTGGTGATACCTTCATGGTATGTAACACTATACATACTTAA 888 0.4662 MVNAMAIDCMHSMPQPPKESSLVFEASVFSHQLNLPSQFIWPDHEKASIHVPELQVPFIDLGGFLSGDPLAAMEASSLVGEACRKHGFFLVVNHGIDRNLITDAHALMDDFFELPLSQKQRAQRKTGEHCGYASSFTGRFSSKLPWKETLSFQYSADKKHSPNLVKDYLCSKLGKEFEQFGNVYEKYCEAMSNLSLGIMELLGMSLGVGKSYFREFFEENNSIMRLNYYPPCQKPDLALGTGPHCDPTSLTILHQDQVGGLQVYVDDQWHSVTPNFNAFVVNIGDTFMVCNTIHT 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03967 295 Pfam non-haem dioxygenase in morphine synthesis N-terminal 56 160 IPR026992 -
Aip09g03967 295 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 219 295 IPR005123 -
Aip09g03967 295 Pfam 2OG-Fe(II) oxygenase superfamily 221 289 IPR044861 -
Aip09g03967 295 PRINTS Isopenicillin N synthase signature 244 265 - -
Aip09g03967 295 PRINTS Isopenicillin N synthase signature 79 96 - -
Aip09g03967 295 PANTHER GIBBERELLIN 20-OXIDASE 16 289 - -
Aip09g03967 295 Gene3D - 26 294 IPR027443 -
Aip09g03967 295 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 16 289 - -
Aip09g03967 295 SUPERFAMILY Clavaminate synthase-like 25 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03967 Aip-Chr9 146108654 146110940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03967 38 285 Glycosyltransferase AT5G59530 28.627 8.53e-24 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03967 K05282 - gmx:100816992 478.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03967 09 146108654 146110940 Aip09g03967 09 146108654 146110940 ECH
Aip05g03739 05 145425652 145427926 Aip09g03967 09 146108654 146110940 PCT