Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03739 ATGGCAATGGAGTGCATAACAAGTACTCAATCCATGACTCAACCACACCAAAACAACAACAAAGAAAGTGAAACAACACCATTGGTGTTTGATGCCTCAATCTTGAGGCATCAACACCAAATCCCAAGCCAATTCATTTGGCCTGACGAGGAGAAGCCAAGCTTGCAAGTATCCAAGCTTGTCATCCCCCTCATCGATCTAGGCGGCTTCCTATCTGGCGACCCAGCCGCCACAATGGAAGCCGTCAGGCTCGTTGGGGAGGCATGCAAGAAGCATGGCTTCTTCCTCGTCGTCAACCACGGGATCAACGCCGACTTGATCTCTAATGCACATAGCTACATGGATGATTTCTTTGAACTTCCCCTGTCTCAGAAACAGAGAGCTCAGAGGAAAACAGGGGAACACTGCGGCTATGCTAGTAGCTTCACTGGCAGATTCTCATCAAAGCTTCCATGGAAGGAGACTCTCTCTTTTCAATTCTCCGCAGAGAAAAGCTCACCAAAGATTGTCAAGGAATACTTATCCAACACAATGGGCAAAGAATTCGAGCAATTCGGGTCAATATACCAAGATTACTGTGAAGCTATGAGCAAACTTTCACTGGGGATAATGGAGCTTCTTGGAATGAGCCTTGGAGTTGGGAAAGAATGCTTCAGGGAATTCTTTGAAGAGAATAGGTCAATAATGAGATTGAACTATTATCCACCATGTCAAAAACCAGACCAAACATTAGGAACTGGACCTCATTGTGATCCAACATCTTTAACCATTCTTCACCAAGACCAAGTTGGTGGCTTGCAAGTGTTTGTTGATAATGAGTGGCATTCCATTACCCCAAATTTCAATGCTTTTGTTGTCAATATCGGAGACACCTTCATGGCGCTTTCAAATGGAAAATACAAGAGTTGTTTGCATAGAGCAGTGGTGAACAAGAAGACAACAAGGAAATCACTTGCTTTCTTTTTGTGTCCAAGAAACGATAAGGTGGTGAGTCCACCAAGAGGATTAGTGGATGATGATTTTAGTCCAAGGGTGTACCCTGATTTTACATGGCCTATGCTTCTTGAGTTCACTCAGAAGTACTATAGAGCTGACATGAACACCCTTAATGCCTTTACCAATTGGATTCAACAAAAAGAAAGTAGCTGA 1149 0.4369 MAMECITSTQSMTQPHQNNNKESETTPLVFDASILRHQHQIPSQFIWPDEEKPSLQVSKLVIPLIDLGGFLSGDPAATMEAVRLVGEACKKHGFFLVVNHGINADLISNAHSYMDDFFELPLSQKQRAQRKTGEHCGYASSFTGRFSSKLPWKETLSFQFSAEKSSPKIVKEYLSNTMGKEFEQFGSIYQDYCEAMSKLSLGIMELLGMSLGVGKECFREFFEENRSIMRLNYYPPCQKPDQTLGTGPHCDPTSLTILHQDQVGGLQVFVDNEWHSITPNFNAFVVNIGDTFMALSNGKYKSCLHRAVVNKKTTRKSLAFFLCPRNDKVVSPPRGLVDDDFSPRVYPDFTWPMLLEFTQKYYRADMNTLNAFTNWIQQKESS 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03739 382 Gene3D - 33 362 IPR027443 -
Aip05g03739 382 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 18 378 - -
Aip05g03739 382 Pfam 2OG-Fe(II) oxygenase superfamily 227 324 IPR044861 -
Aip05g03739 382 SUPERFAMILY Clavaminate synthase-like 34 365 - -
Aip05g03739 382 Pfam non-haem dioxygenase in morphine synthesis N-terminal 62 171 IPR026992 -
Aip05g03739 382 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 225 324 IPR005123 -
Aip05g03739 382 PANTHER ISOPENICILLIN N SYNTHASE-RELATED 18 378 - -
Aip05g03739 382 MobiDBLite consensus disorder prediction 1 23 - -
Aip05g03739 382 PRINTS Isopenicillin N synthase signature 85 102 - -
Aip05g03739 382 PRINTS Isopenicillin N synthase signature 249 270 - -
Aip05g03739 382 PRINTS Isopenicillin N synthase signature 284 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03739 Aip-Chr5 145425652 145427926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03739 40 375 Glycosyltransferase AT5G59530 28.406 2.61e-36 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03739 K05282 - gmx:100305378 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03739 05 145425652 145427926 Aip05g03739 05 145425652 145427926 ECH
Aip05g03739 05 145425652 145427926 Aip09g03967 09 146108654 146110940 PCT