Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03956 ATGAAGCATCATCATCATCTTGTTGTTCTTCTGCTCTTGTTGGTCTGTGGAGTGACCCTATCAGTATCTGAGTCGGAGTCCTATGCTCTTAAGCCTCATATTGCCGAGTCTTTCAATGTCAGCTATCTTCAGCTGAAGAGCCAGGGGAGTTGCTCTTACACGGTGGTTATATCTACTAGTTGTTCTTCTCCTTCTTATACAAGGGATCAGATCAGTATTTCTTTTGGGGATTTTTATGGCAACCAGATATACGTACCGAGATTGGACGATCCGGCTTCAGGTACGTTCGAGCGCTGTTCTTCAGATACCTTTCAGATAAAAGGTCCTTGCGCGTATCAGATATGTTATGTGTACTTATATAGATCCGGCCTAGACGGTTGGATGCCGGAGAGTGTGAAAATCAGTGGTTACTATGGCAAGCCTATTACTTTCTATTACAACACATTCATCCCCAGAGATACATGGTATGGTTTTGATTGGTGCAATGCTGCTTCTTCTTCATACCACCTCTCTTCTCAGAAATGGCTTCTATTTTTGGTTCTGGGATTTGTTCTTCATTTTTGGTTGTAA 570 0.4246 MKHHHHLVVLLLLLVCGVTLSVSESESYALKPHIAESFNVSYLQLKSQGSCSYTVVISTSCSSPSYTRDQISISFGDFYGNQIYVPRLDDPASGTFERCSSDTFQIKGPCAYQICYVYLYRSGLDGWMPESVKISGYYGKPITFYYNTFIPRDTWYGFDWCNAASSSYHLSSQKWLLFLVLGFVLHFWL 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03956 189 CDD PLAT 51 162 - -
Aip09g03956 189 PANTHER EMBRYO-SPECIFIC PROTEIN ATS3B 5 188 - -
Aip09g03956 189 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 48 158 IPR036392 GO:0005515
Aip09g03956 189 Gene3D PLAT/LH2 domain 47 158 - -
Aip09g03956 189 PANTHER - 5 188 - -
Aip09g03956 189 Pfam Embryo-specific protein 3, (ATS3) 43 161 IPR010417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03956 Aip-Chr9 146001580 146003523 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03956 - - gmx:100305495 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03956 09 146001580 146003523 Aip09g03956 09 146001580 146003523 ECH
Aip05g03715 05 145129093 145142250 Aip09g03956 09 146001580 146003523 PCT