Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03715 ATGAATATGAAAGAAGTTGTTGTTGTTCCTCGTCTTGTTCTGTTTCTCTTCTTTGCCTTTGGATTGGCACTTTCAGTCTCTGAGTCCAAAACTATTCCTCATGCTGCTGATGATTCTTTCAGTGTTGGCTATATTCAGAACTGTTCTTACTTGGTGGCCATAAGTACAAGCTGTTCTTCACCTAAGATTACAACTGATGAAATCAGTATTGTTTTTGGTGATGCACAAGGCAACCAGGTATATGCAGAAAGACTGGGTGATAGAATTTCAAAGACATTTGAGCAGTGCTCCTCAGACACATTCCAGATAGATGGTGAATGCACTTCTGAGATATGCTTTGCATACCTTCGTAGATCTGGTTCCAAAACCAATGGTTGGAAGCCTGAGAGTGTTAAAATCTACACCTACAACACTGACCCTGTTACTTTCAATTTCAACACCTCCATCCCCAATGACAAATGGTACGGCTACAATTTCTGCCAGGTTCCGCCGCCGCCATCGCCACCTCATCCTCCTTCTCCTCCTACTCCTTCCTCTTCACACCCTCTATACACCCTCAACCGCCTCATCTATGCTGTTCTAGGACTTGTTCTTAGTCAAATTTGGATGTAA 612 0.4297 MNMKEVVVVPRLVLFLFFAFGLALSVSESKTIPHAADDSFSVGYIQNCSYLVAISTSCSSPKITTDEISIVFGDAQGNQVYAERLGDRISKTFEQCSSDTFQIDGECTSEICFAYLRRSGSKTNGWKPESVKIYTYNTDPVTFNFNTSIPNDKWYGYNFCQVPPPPSPPHPPSPPTPSSSHPLYTLNRLIYAVLGLVLSQIWM 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03715 203 Pfam Embryo-specific protein 3, (ATS3) 45 160 IPR010417 -
Aip05g03715 203 Gene3D PLAT/LH2 domain 46 157 - -
Aip05g03715 203 PANTHER - 11 201 - -
Aip05g03715 203 PANTHER EMBRYO-SPECIFIC PROTEIN 11 201 - -
Aip05g03715 203 CDD PLAT 48 160 - -
Aip05g03715 203 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 45 157 IPR036392 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03715 Aip-Chr5 145129093 145142250 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03715 - - ahf:112751675 331.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03715 05 145129093 145142250 Aip05g03715 05 145129093 145142250 ECH
Aip05g03715 05 145129093 145142250 Aip09g03956 09 146001580 146003523 PCT