Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03786 ATGAAAGGGAAAGCCAAAAGATCGAAAGTGAAGTTGGGGGTTCCTGTTCTGGTAATGGTTTGCTCCCTTTTCTTCTTTACTGGGCTCTTTGTATCTCCTATGCTCTTCAACTTTCAGGATTTTGGTGACGTGGGACAGGGGCAACCGTGGTCGAGATTGCTTCAGGAATCTGCTGCCAAAGAATATGGCAAGTCTGGAGACCCCTTTCTTCATTCAATCTCATTTCAGATTTTGAGTTGGCGACCAAGGATAGTTTACTTTCCGAATTTCACAACTGCAGATGTATGCGAAAAAATAATTGAAATGGCAAAGCCTAAATTGGAACCCTCTAAATTGGCATTGAGGGAAGGAGAAACTGTTGAGAGCACAAAAGGCACTCGAACAAGTTCAGGTGCATTCATCTCTGCATCAGAAGACAAATCTGGTATCTTAGACTTCATTGAAAAGAAAATTGCTAAGGTTACAATGATACCAACGAGTCATGGAGAAGCATTCAATATACTGAGATATGAGGTTCTTCAGAAATATGATACTCATTATGATGCCTTCGACCCATTTGAATATGGAAATGTTCGGAGCCAAAGGATTGCTTCGTTTTTACTATACCTATCAACTGTAGAAGCAGGAGGAGAAACCATGTTCCCTTTTGAGGATGGTTTGAACATGGACATTGGTTATGATTATAAACAATGCATTGGTTTGAAGGTGAAGCCAAGACAAGGTGACGGGCTTTTATTCTATTCAGTTCTTCCAGATGGGAACATTGATAAGACTTCTCTTCATGGAAGCTGTCCAGTGATTGAGGGGGAGAAATGGGTGGCAACTAAGTGGATCAATGATAAAAAGCAACACTACTAA 858 0.4079 MKGKAKRSKVKLGVPVLVMVCSLFFFTGLFVSPMLFNFQDFGDVGQGQPWSRLLQESAAKEYGKSGDPFLHSISFQILSWRPRIVYFPNFTTADVCEKIIEMAKPKLEPSKLALREGETVESTKGTRTSSGAFISASEDKSGILDFIEKKIAKVTMIPTSHGEAFNILRYEVLQKYDTHYDAFDPFEYGNVRSQRIASFLLYLSTVEAGGETMFPFEDGLNMDIGYDYKQCIGLKVKPRQGDGLLFYSVLPDGNIDKTSLHGSCPVIEGEKWVATKWINDKKQHY 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03786 285 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 4 282 IPR045054 -
Aip09g03786 285 SMART p4hc 82 279 IPR006620 GO:0005506|GO:0016705|GO:0031418
Aip09g03786 285 Pfam 2OG-Fe(II) oxygenase superfamily 166 279 IPR044862 -
Aip09g03786 285 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 160 280 IPR005123 -
Aip09g03786 285 Gene3D q2cbj1_9rhob like domain 75 279 - -
Aip09g03786 285 PANTHER PROLYL 4-HYDROXYLASE 13-RELATED 4 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03786 Aip-Chr9 144622244 144625564 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03786 K00472 - gmx:100813618 448.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03786 09 144622244 144625564 Aip09g03786 09 144622244 144625564 ECH
Aip05g00583 05 7080823 7086224 Aip09g03786 09 144622244 144625564 PCT