Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00583 ATGAAAGGCAAAGCGGTTAAAGGACACTTGATCTGGAACACAAGGAAGTTCAGCAAGCCTTCCATACTCATATGCATTTTCTTCTTTCTCGCTGGATTATTCGGTTCTAGCATTTTCTTTCACTCTCAGGAAGATACGAATGAAGGCTTGAGACTGAGAAGGAGTGAGTCGAGGTTGCTTAGATCGACGACGGAGAAAACGGAGTACAATTTGTTGCGCGCAGGAGAGTTAGGTGACAATTCCATCACGTTGATTCCTTTCCAGGTTTTGAGTTGGATGCCTCGCGCTCTCTATTTTCCTAATTTTGCGAGTTCAGAACAATGTGACAGTATAATTGAAATGGCAAGGGAAAGACTCGAACCATCAACTGTGGCATTACGGAAGGGAGAAACGAAAGCGAGTGCAGAGGGAATTAGAACAAGCTCTGGTATGTTTATTAAAGCTAACGAGGATGAAACAGGGATTTTAGATGTTATTGAGGAGAAAATAGCCAGAGCAACTAAAATTCCCCGGAGTCATTTTGAGGACTTTAATGTACTCCGCTATGAGATTGGACAGAGATATGCTTCTCATTATGACGCTTTCAATTCTGTGGAATACGGTCCACAAGAGAACATGAGGGTTGCTACATTTTTGCTGTATTTAACGGACGTTCCAGAAGGTGGGGAGACGATATTTCCATTTGAGAATGGCATGAACATGGACGTTAGCTACAACTACAAGGATTGTGTTGGCTTAAAAGTAAAGCCACGCAAGGGGGATGGACTTCTATTTTACTCGTTGTTCCTTAATGGTTCAATTGATCCGACATCACTCCACGGAAGCTGCCCCGTAATAAAAGGGGAGAAGTGGGTGGCGACAAAGTGGATGAGGGAACAAGTATATGGATAA 891 0.431 MKGKAVKGHLIWNTRKFSKPSILICIFFFLAGLFGSSIFFHSQEDTNEGLRLRRSESRLLRSTTEKTEYNLLRAGELGDNSITLIPFQVLSWMPRALYFPNFASSEQCDSIIEMARERLEPSTVALRKGETKASAEGIRTSSGMFIKANEDETGILDVIEEKIARATKIPRSHFEDFNVLRYEIGQRYASHYDAFNSVEYGPQENMRVATFLLYLTDVPEGGETIFPFENGMNMDVSYNYKDCVGLKVKPRKGDGLLFYSLFLNGSIDPTSLHGSCPVIKGEKWVATKWMREQVYG 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00583 296 Gene3D q2cbj1_9rhob like domain 87 291 - -
Aip05g00583 296 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 20 293 IPR045054 -
Aip05g00583 296 PANTHER PROLYL 4-HYDROXYLASE 13-RELATED 20 293 - -
Aip05g00583 296 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 173 292 IPR005123 -
Aip05g00583 296 Pfam 2OG-Fe(II) oxygenase superfamily 177 291 IPR044862 -
Aip05g00583 296 SMART p4hc 94 291 IPR006620 GO:0005506|GO:0016705|GO:0031418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00583 Aip-Chr5 7080823 7086224 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00583 K00472 - gmx:100776115 409.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00583 05 7080823 7086224 Aip01g01070 01 23195741 23200451 ECH
Aip05g00583 05 7080823 7086224 Aip05g00583 05 7080823 7086224 ECH
Aip05g00583 05 7080823 7086224 Aip09g03786 09 144622244 144625564 PCT