Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03305 ATGGCTTCCAACAAGAGAAGTAACACTCATCAAGCATTAGCATTGCTCCTGTTCTTCCTCCTCACCCTCTCCTCTGCACATGCCAAAGGTGGCATAGCCATCTACTGGGGCCAGAACAATGGCGACGGTACCTTAACCTCCACATGTGACACCGGAAACTTTGAGATTGTGATCCTCGCCTTTCTCTACACTTTCGGTTGTGGCAGAACTCCAGATTGGAACTTTGCTGGCCACTGTGGGCCATGGTCCCCTTGTGACAAACTCGAACCAGAAATTAAACATTGCCAAAGCAACGGTGTGAAGGTGTTCCTCTCCCTTGGAGGAGCCGTTGGGCCCTACTCCTTATGCTCACCGGAAGATGCCAAGAACGTCTCCGACTACCTTTACAACAACTTCCTCACTGGCCAAAAGGGTCCATTAGGGAGTGTGTACCTTGATGGCATTGATTTCGACATTGAAGGTGGTGGTGTGAACCTTTATTGGGATGACTTGGCTAGAGAACTCGATACACGCAGAAAACAAGACAGGTACTTTTACTTGTCGGCAGCACCACAATGTTTCTTCACAGATTACTACCTTGATACCGCCATTAGAACTTGGCTTTTCGATTACCTCTTCATCCAATTCTACAACAACCCTCCATGCCAATATAGTAACGGCGACGCATCTTTGCTCTTATCTTCTTGGAATACATGGACCTCCTATGTGAAGCTCAACAACACGGTGTTTATGGGGCTACCCGCTGCACCTGATGCAGCTCCCAGCGGTGGCTATATTTCACCGCAAGATCTATGTACTAAGGTTCTTCCAATCATCAAGCACACTCCTAACTATGGTGGCGTCATGCTATGGGATAGGTTCCGCGATGTTACTAACCACTACAGCGATCAAATCAAGGATTGTGTTAAAGTTGATGATAGTGTTAGGGTGTCACAGACTGTGATGGCAACGTTATCGAACACTGTATATGAATGTGTATCTGCAGCTTTCAACCGCATCATACCAAAACTGAGACCTTTTTAG 1023 0.4692 MASNKRSNTHQALALLLFFLLTLSSAHAKGGIAIYWGQNNGDGTLTSTCDTGNFEIVILAFLYTFGCGRTPDWNFAGHCGPWSPCDKLEPEIKHCQSNGVKVFLSLGGAVGPYSLCSPEDAKNVSDYLYNNFLTGQKGPLGSVYLDGIDFDIEGGGVNLYWDDLARELDTRRKQDRYFYLSAAPQCFFTDYYLDTAIRTWLFDYLFIQFYNNPPCQYSNGDASLLLSSWNTWTSYVKLNNTVFMGLPAAPDAAPSGGYISPQDLCTKVLPIIKHTPNYGGVMLWDRFRDVTNHYSDQIKDCVKVDDSVRVSQTVMATLSNTVYECVSAAFNRIIPKLRPF 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03305 340 Pfam Glycosyl hydrolases family 18 32 289 IPR001223 GO:0005975
Aip09g03305 340 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 145 153 IPR001579 GO:0004553|GO:0005975
Aip09g03305 340 Gene3D Glycosidases 27 317 - -
Aip09g03305 340 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 30 305 IPR001223 GO:0005975
Aip09g03305 340 PANTHER ENDOCHITINASE 11 299 - -
Aip09g03305 340 PANTHER III ACIDIC ENDOCHITINASE, PUTATIVE-RELATED 11 299 - -
Aip09g03305 340 CDD GH18_hevamine_XipI_class_III 30 300 IPR045321 -
Aip09g03305 340 SUPERFAMILY (Trans)glycosidases 29 298 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03305 Aip-Chr9 139450086 139451723 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03305 16 298 Glycoside Hydrolase AT5G24090 50.865 1.90e-94 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03305 K01183 - gmx:547449 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03938 05 147603724 147605157 Aip09g03305 09 139450086 139451723 ECH
Aip09g03305 09 139450086 139451723 Aip09g03305 09 139450086 139451723 ECH
Aip05g03938 05 147603724 147605157 Aip09g03305 09 139450086 139451723 PCT