Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03270 ATGCCCGCAACGGACTACCAAGGTTCGTCTCCGTCATCATTGTCCCATTTCGGCCGTTCATTTCTGAACATACACCGTGATCATCAGGTTCACTCCATGGAAGGTTCAAGCTTGGAGGTGGAGCTGGAATCGTTTCAGCAACACGTGACTGACCAGTTCCTTGAGCTGTCGTCGGTTAGCCATGAAGAATTGGTGTCACTTTCATGGGTTGGGAAGCTCCTTGATTCGTTCCTGTGCTGCCAAGAGGAGTTCAGGGCCATCCTCCACACCCACAAGGTGCTTGTTTTAAGGCCACCCTCGGATCGCATGGTGTCTGAGTACTTTGAGCGAAGTGTGAAGGCCTTGGATGTTTGCAATGCAATCCGTGATGGGATTGAGCAGATTCGCCAATGGCAGAAGCTCTTGGAGATTGTTCGTTGTGCAATGGGAGGGAACCAGAGGAGCATTGGTGAGGGCCAATTTCGAAGAGCAAAGAAGGCTCTTATTGATTTGGCAATTGGTATGCTTGATGATAAGGATTCTTCTAATGCCTCCATTAATGCACATAGGAATAGGTCATTTGGCCGCAACACTGGTGGTGGTAGAGACCACCATCATAATAACAATCTTCACAATCGATCGTTGGGGCATTTTCGATCCCTTTCGTGGAGTGTTTCTCGAACTTGGTCTGCTGCTAGGCAGCTCCAAGCAATTGGGAACAATATGCATCCGCCTAAGGCTAATGAGCTTGTGGCTTCCGGAGGCCTTGCAATGCCGGTTTTCATCATGAATTCGGTGCTTTTGTTCGTCATGTGGTGTCTTGTGGCTGCAATTCCCTGCCAGGATCGCGGCCTTCAAGTCCATTTCAACATTCCTAGGAACTTCTTGTGGGCTGCTCCAATGCTATCGCTCCACGACAGGATCATGGAGGAGTCCAAGAAGAGGGACCGGAAGAATGCGTGTGGATTGCTCAGGGAGATTCATCAGATTGAGAAATGTGCTAGAGTGATGAATGAGTTGGCTGATTCAGTTCAGTTCCCATTGACAGAGGAAAAGGAAGCTGATGTTAGGCACAGAGCTCAAGAGGTTGCACAACTTTGTGATGCTTTGAAAGATGGGCTAGACCCTTTGGAGCGCCAAGTTAGGGAAGTGTTCCATAGAATTGTGAGAAGCAGAACAGAAGGGCTTGATTCTCTTGGAAAGCAAAACCTTGCTGATTAA 1200 0.485 MPATDYQGSSPSSLSHFGRSFLNIHRDHQVHSMEGSSLEVELESFQQHVTDQFLELSSVSHEELVSLSWVGKLLDSFLCCQEEFRAILHTHKVLVLRPPSDRMVSEYFERSVKALDVCNAIRDGIEQIRQWQKLLEIVRCAMGGNQRSIGEGQFRRAKKALIDLAIGMLDDKDSSNASINAHRNRSFGRNTGGGRDHHHNNNLHNRSLGHFRSLSWSVSRTWSAARQLQAIGNNMHPPKANELVASGGLAMPVFIMNSVLLFVMWCLVAAIPCQDRGLQVHFNIPRNFLWAAPMLSLHDRIMEESKKRDRKNACGLLREIHQIEKCARVMNELADSVQFPLTEEKEADVRHRAQEVAQLCDALKDGLDPLERQVREVFHRIVRSRTEGLDSLGKQNLAD 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03270 399 PANTHER OS04G0688000 PROTEIN 1 396 - -
Aip09g03270 399 PANTHER BPS1-LIKE PROTEIN 1 396 - -
Aip09g03270 399 Pfam Protein ROH1-like 15 392 IPR008511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03270 Aip-Chr9 138703105 138705212 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03270 - - ccaj:109812538 612.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03270 09 138703105 138705212 Aip09g03270 09 138703105 138705212 ECH
Aip05g03984 05 148114795 148116621 Aip09g03270 09 138703105 138705212 PCT