Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03984 ATGTCTGCAATCATGGATGATCAAGGTTCCTCTGTTATGTCTATCCGTGGAAACCAAGTTCACTCCATGGATGGTTCAAGCTTGGAGCTTGAGTTAGAAACCTTTCAGAGACAAGTCACGTTGCGGTTCCTTGAGCTGGCCGCGGTTGGAAATGATGATTTGCTTTCACTCGCATGGATGAGGAAGCTCCTTGATATCTTCATCTTATGCCAAGACGAATTGAGGATGATTTTCTTCAATCACAGGGCTCAGGTCATGAAGCCCCCAATGGACCGAATTGTTTCTGATTTCTTTGAACGCTGCGTGAAGGCCCTTGATCTCTGCAACGCCGTCCGTGACGGAATTGAACAGATTAAGCAGTGTCAGAGGCTGTTAGAGATTGTTCTATGTGCATTGGATCAAAAGAGGATCATTGGTGAGGGCCAATGCCGCCGTGCCAAGAAGGCTCTCGCTGATTTGGCTAATTGTATGTTTGATGATAAGGAATCTAGTGCTTACATGGCTCTTAGGAATAGATCCTTTGGTAGAAACACTACCATTAAGGATTTGTATCAAATTCACAATCAAAATAGTAACTACCAGCACCGATCAGTGGGCCATTTTCGATCGCTCTCATGGAGCGTTTCGAGGAATTGGTCTGCTGCTAAGCAGCTCCAAGCAATTGGGAACAGCTTGTGCCCCCCTAAGAGTAATGATCTTGTGGCCACTAATGGCCTTGCTATGCCGGTTTATACGATGAGCTCGGTCCTGTTGTTTGTAATGTGGGCTCTTGTGGCTGCAATTCCATGCCAGGATCGCAGATTGCAGCTCCACATTTTGATTCCGAGACAGTTTCCTTGGTCTGCGCCGTTGCTGTCGCTCCATGAGAGGATCATGGAGGATTCCAAGAAGAAGGAGAGGAAGAATGCTTGTGGCTTGCTGAGGGAGATTCAACAGATTGAGAAATGTGCTAGGGTGATAAATGAGTTGGTTGACACTTTGCAGTTTCCATTAGCTGAGGAGAAAGGAGAGGAGGTTAGACAAAGAGTGCAAGATCTTTCACATGTTCTTGAGGCCCTCAAGGATGGATTAGACCCGTTGGAACGCCAAGTAAGGGAGGTGTTCCATGTAATTGTGCGCGGCCGAGTAGGGACTTGA 1137 0.4688 MSAIMDDQGSSVMSIRGNQVHSMDGSSLELELETFQRQVTLRFLELAAVGNDDLLSLAWMRKLLDIFILCQDELRMIFFNHRAQVMKPPMDRIVSDFFERCVKALDLCNAVRDGIEQIKQCQRLLEIVLCALDQKRIIGEGQCRRAKKALADLANCMFDDKESSAYMALRNRSFGRNTTIKDLYQIHNQNSNYQHRSVGHFRSLSWSVSRNWSAAKQLQAIGNSLCPPKSNDLVATNGLAMPVYTMSSVLLFVMWALVAAIPCQDRRLQLHILIPRQFPWSAPLLSLHERIMEDSKKKERKNACGLLREIQQIEKCARVINELVDTLQFPLAEEKGEEVRQRVQDLSHVLEALKDGLDPLERQVREVFHVIVRGRVGT 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03984 378 Pfam Protein ROH1-like 8 376 IPR008511 -
Aip05g03984 378 PANTHER PLANT/F1M20-13 PROTEIN 6 376 - -
Aip05g03984 378 PANTHER BPS1-LIKE PROTEIN 6 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03984 Aip-Chr5 148114795 148116621 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03984 - - gmx:100806977 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03984 05 148114795 148116621 Aip09g03270 09 138703105 138705212 PCT