Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01664 ATGTCCGATACCCAACAAACCCTAATGCCCCTTCACTCCCCCGACCCCGACGATAACGACGAATCCCCTCCTAACCAACCCCAACCCGCATCCCCTGACCCAACCCGAACCGGAACCGGAACCGCCATCGCCACCGCCCCTTCCCTCCTCCACCTCTCCTTCAACCAGGACTCTGGCTGCTTCGCCGCCGGCACCGACCGCGGCTTCCGCATCTACAACTGCGATCCTTTCCGCGAGATATTCCGCCGCGACTTCGGCCCAGGCGGCGGCACCTCTCTCGTTCACATGCTCTTCCGGTGCAACATCCTCGCCTTCGTCGGCGGCGGACCCGACCCTCGCCACCCTCCGAACAAGGTCATGATCTGGGACGACCACCAGTCGCGGTGCATTGGCGAGCTCTCATTCCGCTCCGAGGTCAAAGGCGTTCGCCTCCGAAGAGACCGAATCGTTGTGGTTCTCGCGCACAAGATTTTCGTGTACAATTTTGCCGACCTGAAGGTTCTTCACCAGATTGAGACAATTGCGAACCCTAAGGGTTTGTGCGAGGTTTCGCACTTGTCCGGGACGATGGTTCTTGCATGCCCTGGGTTGCAGAAGGGGCAGGTTAGAGTTGAGCATTACGCCTCAAAGAGGACAAAATTCATCATGGCTCATGATTCGAGGATCGCGTGCTTCTCGCTCACGCAGGATGGGAGGTTGCTCGCTACTGCGAGCAGTAAAGGAACCTTGGTGAGGGTTTTCAATACGTTAGATGGGTCCTTGTTGCAAGAGGTACGGAGAGGTGCAGACCGTGCGGAAATATACAGCCTTGCCTTCTCTCCTACTGCACAGTGGCTAGCTGTTTCGAGTGATAAGGGGACCGTTCATGTCTTCAACTTAAAGGTTGATTCTGGACTTTTGGGGCTTGACAGATCGAATAGTTCATCTGAGTCAAATCCTAGTTCCCCAACAGCAGTTTCATCTCTTAAATTTATGAAAGGTGTTTTACCCAAGTACTTTAGCTCAGAGTGGTCTGTGGCTCAGTTTCGCCTGCAGGAAGGTTTGCAGCATATTGTTGCCTTTGGCCATCAAAAGAATACAATTGTTATACTTGGCATGGATGGCAGCTTTTATCGATGCCAGTTTGATTCTGCAAATGGAGGAGAGATGACCCAACTTGAATATTACAATTTCCTCAAGACAGATGAGACATTCTAA 1197 0.5288 MSDTQQTLMPLHSPDPDDNDESPPNQPQPASPDPTRTGTGTAIATAPSLLHLSFNQDSGCFAAGTDRGFRIYNCDPFREIFRRDFGPGGGTSLVHMLFRCNILAFVGGGPDPRHPPNKVMIWDDHQSRCIGELSFRSEVKGVRLRRDRIVVVLAHKIFVYNFADLKVLHQIETIANPKGLCEVSHLSGTMVLACPGLQKGQVRVEHYASKRTKFIMAHDSRIACFSLTQDGRLLATASSKGTLVRVFNTLDGSLLQEVRRGADRAEIYSLAFSPTAQWLAVSSDKGTVHVFNLKVDSGLLGLDRSNSSSESNPSSPTAVSSLKFMKGVLPKYFSSEWSVAQFRLQEGLQHIVAFGHQKNTIVILGMDGSFYRCQFDSANGGEMTQLEYYNFLKTDETF 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01664 398 Gene3D - 49 379 IPR015943 GO:0005515
Aip09g01664 398 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 25 398 - -
Aip09g01664 398 PANTHER AUTOPHAGY-RELATED PROTEIN 18A-LIKE ISOFORM X1 25 398 - -
Aip09g01664 398 MobiDBLite consensus disorder prediction 1 41 - -
Aip09g01664 398 SUPERFAMILY WD40 repeat-like 48 294 IPR036322 GO:0005515
Aip09g01664 398 Pfam WD domain, G-beta repeat 261 292 IPR001680 GO:0005515
Aip09g01664 398 SMART WD40_4 39 73 IPR001680 GO:0005515
Aip09g01664 398 SMART WD40_4 251 292 IPR001680 GO:0005515
Aip09g01664 398 SMART WD40_4 208 248 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01664 Aip-Chr9 37828565 37832229 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01664 K22991 - gmx:100787427 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g01664 09 37828565 37832229 Aip09g01664 09 37828565 37832229 ECH
Aip06g00222 06 2368826 2369947 Aip09g01664 09 37828565 37832229 PCT