Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00222 ATGTCAGTTGCACCGGTTGAGAGCATCCCCTCTTTAAGTAGTGACCTCTTCTATGACATACTGCGAAGGCTTGATGGCGCGACATTGGCAAGCGCGGCGTGCACCTGTGCTGCACTTTGCTCCATCTCAAAAGAAGAGAGTTTATGGGAAAATGTATGTTCATCTATGTGGCCTTCAACCAATAGGGAAGATGTCAAAAGTTTAATCTCTTCTGTTGGTGGATTCAGAAAATTCTATGCAGACAGTTTTCCACTTATTGTGAACAAGGATGTTATGGAGTTTCATCACAACAACTACTTTGAGTACCCTGATGATTGGACCGAAGCCGAATATTATGATAGCGAAGGCAACAACGATGGCGCCGTGAATCTTTCCATTTCTGATGGTCTGCCAGCAATTACATCCATGGAAAGGGAAAAGAAAGATGGGAAGCTTTGGAAGGAGCTTAGCAATGGACTCAGGCTTAGTTGGATTGTAGTAAACAGAAAAATCAAGCAAGCTGCAAATCTTTCTAGTTGGTTTCCTCTTGGTGGCCAAAGGCATTGGCCAACAGATAATGATTTTGTAGTCCGGTTCGGATCGATTCTCCCGGCCGAGGAAATTCTTCCTTGCCAAGTAGTGGAGTGCATCCTTATCATGAAGTTTAGAGTTGTCCACACAGAATCAGAGGGGATTCAAACTAGTCTTAAGTTAACTGAATTGAGCATGCAATTGGAAGACATGGAAGGTGCTCATGTTAATGGAAGAAACAGTTTGCATATTCTTAAGAAAGCACTTAGTTGCCAAAGGAGCAAAAACTATGGTGATGCACTTGAGTCTTGTCACATGTATTCAAAGGTGCAGAATGAGTTGAAGAAGGAAAAGATGAGAAATGAAAATAGGTTGGATAGGCTTTGTATTCTGAGTGGCATTGCTGCTTTTATGACATTCTGGTACTGTGTCCTGTGA 948 0.4241 MSVAPVESIPSLSSDLFYDILRRLDGATLASAACTCAALCSISKEESLWENVCSSMWPSTNREDVKSLISSVGGFRKFYADSFPLIVNKDVMEFHHNNYFEYPDDWTEAEYYDSEGNNDGAVNLSISDGLPAITSMEREKKDGKLWKELSNGLRLSWIVVNRKIKQAANLSSWFPLGGQRHWPTDNDFVVRFGSILPAEEILPCQVVECILIMKFRVVHTESEGIQTSLKLTELSMQLEDMEGAHVNGRNSLHILKKALSCQRSKNYGDALESCHMYSKVQNELKKEKMRNENRLDRLCILSGIAAFMTFWYCVL 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00222 315 SUPERFAMILY F-box domain 6 99 IPR036047 GO:0005515
Aip06g00222 315 PANTHER F-BOX PROTEIN-RELATED 117 311 IPR045283 -
Aip06g00222 315 PANTHER F-BOX PROTEIN-RELATED 4 106 IPR045283 -
Aip06g00222 315 PANTHER F-BOX PROTEIN-RELATED 4 106 - -
Aip06g00222 315 PANTHER F-BOX PROTEIN-RELATED 117 311 - -
Aip06g00222 315 Gene3D - 3 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00222 Aip-Chr6 2368826 2369947 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00222 - - gmx:100500689 514.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00222 06 2368826 2369947 Aip06g00222 06 2368826 2369947 ECH
Aip06g00222 06 2368826 2369947 Aip09g01664 09 37828565 37832229 PCT