Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01517 ATGGGACATAGTAAGGGCAATGCCATTGATTCAAAACTATATATTAACCTCTATATCTCCCTTGAAATAATCAAACACCAAAACGTAGCAAACAACCAAAAAAAGATAATAATGTCTCTAGTGACCGAAGAGATCAAGGCCAAATCAGAGGTGTACCGAGGAGATGAACTGTGCCAAGAGAAAACACAGCTTCTCCTGAAGGAAGTAGGGTTACCCAATGGGTTACTTCCATTGAAGGACATGGAGGAGTGTGGGTACGAAAAGGAGAGTGGGTTCGTGTGGCTGAAGCAGAAAAAGAGCTCAACACACAAGTTCGAGAAGATTGGGAAGCTTGTGAGTTATGCCCCTGAGGTCACTGCGTATGTTGAGGTTGGGAAGATCAAGAAGCTCACTGGTGTCAAGACCAAGGAGCTTCTTCTTTGGCTCACACTCACTGATATCTATGTCGATAACCCACCGACCGGAAAGATCACTTTCCAGATCTCGTCAGGGCTATCCCGGTCATTTCCGGCTTCCGCCTTCGAAGTCGAAGAGAAAGTTAAGGAGGAGAAGAAGGAGAAGGGGAGTGAAGTTAAAGAAGGAGCTGCCGCTGCTGCTGCTGCTGCAACTGCTGTTCAAGTCAAAGAGGTTTGA 633 0.4613 MGHSKGNAIDSKLYINLYISLEIIKHQNVANNQKKIIMSLVTEEIKAKSEVYRGDELCQEKTQLLLKEVGLPNGLLPLKDMEECGYEKESGFVWLKQKKSSTHKFEKIGKLVSYAPEVTAYVEVGKIKKLTGVKTKELLLWLTLTDIYVDNPPTGKITFQISSGLSRSFPASAFEVEEKVKEEKKEKGSEVKEGAAAAAAAATAVQVKEV 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01517 210 SUPERFAMILY At5g01610-like 32 179 IPR036758 -
Aip09g01517 210 PANTHER PLANT/F25P12-18 PROTEIN 39 198 - -
Aip09g01517 210 Pfam Protein of unknown function, DUF538 65 175 IPR007493 -
Aip09g01517 210 Gene3D - 41 185 IPR036758 -
Aip09g01517 210 PANTHER T31J12.3 PROTEIN-RELATED 39 198 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01517 Aip-Chr9 28951762 28952840 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01517 - - gmx:100500427 228.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g01517 09 28951762 28952840 Aip09g01517 09 28951762 28952840 ECH
Aip06g00866 06 11833561 11834576 Aip09g01517 09 28951762 28952840 PCT