Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00866 ATGTCTCTGGTAACAGAAGAAATCAAAGCTAGGTCAGAGGTATATCATGGAGACGAAATGTGTCAGGTGAAGTCGAAGGAGCTTCTAAAGGAGATCGAACTTCCCAACGGTCTGCTGCCATTGAAGGACATGGAGGAGTGCGGTTACGACAGAGGAACGGGGTTCGTGTGGCTGAAGCAGAAGAAACCCTACACGCACAAGTTCGAGAAGATTGGGAAGCTTGTGTCGTACGCGGCGGAGGTGACGGCGCAGGTGGAGAAAGGGAAGATCAAGAAGCTGACCGGAGTGAAGACGAAGGAGATTTTGCTGTGGGTTACGCTCAGTGACATCTATGTCGATGACCCTCCCACCGGCAAGATCACTTTCAAGACGCCCGCAGGGCTATTCAGGTCTTTTCCTGTCTCTGCCTTCGAGCTTGAGGAAGAGAAAGACAAGTCCGACGATGTCAAGGCTTCCGCCGCCGCCACCACCACGCAGGTCGACGAAGCCGTTCAGGTCAAGGAGGTCTGA 510 0.5333 MSLVTEEIKARSEVYHGDEMCQVKSKELLKEIELPNGLLPLKDMEECGYDRGTGFVWLKQKKPYTHKFEKIGKLVSYAAEVTAQVEKGKIKKLTGVKTKEILLWVTLSDIYVDDPPTGKITFKTPAGLFRSFPVSAFELEEEKDKSDDVKASAAATTTQVDEAVQVKEV 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00866 169 SUPERFAMILY At5g01610-like 3 145 IPR036758 -
Aip06g00866 169 Pfam Protein of unknown function, DUF538 26 138 IPR007493 -
Aip06g00866 169 PANTHER PLANT/F25P12-18 PROTEIN 2 154 - -
Aip06g00866 169 Gene3D - 5 149 IPR036758 -
Aip06g00866 169 PANTHER T31J12.3 PROTEIN-RELATED 2 154 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00866 Aip-Chr6 11833561 11834576 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00866 - - vra:106757663 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00866 06 11833561 11834576 Aip06g00866 06 11833561 11834576 ECH
Aip06g00866 06 11833561 11834576 Aip09g01517 09 28951762 28952840 PCT