Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01483 ATGGCTAAGGAAACTTCTCTGTGCTTCTTGTTTCTCTCATTTTTCATTACCTCATCGTGTTCTGGAGATTTAGTGGGATTTTCAATCAACGTGCCACAATCGCGTAATCGAATCTTAGTCACAGATCATAGGATCTTGAACTCTCCAACAATCTCCGATTTCTCGATTGATTTCTACCTCAATAAAAGCCTAACTCAAAACTTCATCACTTCAAAACCCTGTTCACTAGTTCCATGGCTAAATTCCCACGTACTGAACTTACTTCCACAACAAAACATCAAAAGCATCAGTTTTTCTTGTGGAAGTGAGTGCTTCACCAAGAATCAGATACCTTCACTGGTATCTTCTCTTAGATCAGTTCATTCAGTTCTAACTAACAAAGTAAAACTCTCTGTAGCGTTTCCTTTGTCATTGTTAGAAAATTTGAAGAGTGCATCGCATGAGAGAGATCTAAGTAACATCCTTTCATTTATAAAGGAAACAAAATCTTATGTGATGATAGAGGACAACATGAACAAATATTTGGATGTTAAGTTTATTCTAGAACGTGCCACGACTGCTGCTTCTACTTTTGGTTGGGAAGACGTTCCTCTGATTCTATCAATCAAGAGTAAAGTAATCCCGATTTCGGCAAAACTATCAATGTCAAACCACATGGAATCAAGAAGCAACAAGATCATGGAAAGAATAGTTGCATTGTATGCACAAGAAGTAGACACAACAGAGGAGGAGGATCTGTTTCCGGAATCCAACAAAAGAAGAACTCTAGATGAAACAACAAACTCAGTAATCACACCACCAGATACACCAACCATAATCACAGTTCCTTCAACGAACCCTGTCACAATTTCACCAACAACAACCAATCCATCCACAATGCCAGTAACAATTCCTTCTTCAACACCGGTTCCTTTAACAACAAATAATCCACCGCCAGCACCGGTAACCAATCCTGGAACATCTTTTGCGCAGCCGCCTCCCACTGCACCTGCCCTGCCGCCTCCGGCCACACAGGGTGGTGGACAGAGCTGGTGTGTGGCGAAGAATGGGGCGGCGGAAACAGCGCTGCAAGCAGCATTGGACTATGCTTGTGGAATGGGGGGTGCTGATTGTTCTCAGATACAGCAAGGTGGGAGTTGTTATAGTCCAGTTACTCTGCAGAATCATGCTTCTTTTGCTTTCAATAGTTACTATCAGAAGCATCCTGGATCAACAAGCTGTGACTTTGGAGGAACTGCTACCTTAGTTAACACCAATCCAAGCTCCGGGTCTTGCATTTTCCCATCATCGTCGTCATCATTAAATTCACAATCACCAACAACACCTATGCAATCACCCCCAACAACAACAACAACTACACCACCAATGACAACAACTCCACCAAGCACCACAACTTATCCACCATCAACTCCAAAATCACCACCTACACCTTCAACTCTTACAGCGCCACCAACAACACCGTCTTCGTCGTCATCTACTACAGGATCCGGCACATCCGGCTATGGTACCCCACCTTCAGTGTTGAACTCAAGCAGCCCAACAACATCAACATCAGGTATAATGCCAGGTTTTGGGTCCCAAACTACTCCTCCTGAAGCAAGCACCACCACCACGTCATCATCGTCCTCCTCACTATTACCCATTGTTGGATACATGGTTCAGCTTTTGATATCATTTGTCACTGCAACACTCATTTTGCTCCCTTAA 1707 0.4329 MAKETSLCFLFLSFFITSSCSGDLVGFSINVPQSRNRILVTDHRILNSPTISDFSIDFYLNKSLTQNFITSKPCSLVPWLNSHVLNLLPQQNIKSISFSCGSECFTKNQIPSLVSSLRSVHSVLTNKVKLSVAFPLSLLENLKSASHERDLSNILSFIKETKSYVMIEDNMNKYLDVKFILERATTAASTFGWEDVPLILSIKSKVIPISAKLSMSNHMESRSNKIMERIVALYAQEVDTTEEEDLFPESNKRRTLDETTNSVITPPDTPTIITVPSTNPVTISPTTTNPSTMPVTIPSSTPVPLTTNNPPPAPVTNPGTSFAQPPPTAPALPPPATQGGGQSWCVAKNGAAETALQAALDYACGMGGADCSQIQQGGSCYSPVTLQNHASFAFNSYYQKHPGSTSCDFGGTATLVNTNPSSGSCIFPSSSSSLNSQSPTTPMQSPPTTTTTTPPMTTTPPSTTTYPPSTPKSPPTPSTLTAPPTTPSSSSSTTGSGTSGYGTPPSVLNSSSPTTSTSGIMPGFGSQTTPPEASTTTTSSSSSSLLPIVGYMVQLLISFVTATLILLP 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01483 568 MobiDBLite consensus disorder prediction 304 334 - -
Aip09g01483 568 MobiDBLite consensus disorder prediction 460 482 - -
Aip09g01483 568 MobiDBLite consensus disorder prediction 260 337 - -
Aip09g01483 568 Pfam X8 domain 344 414 IPR012946 -
Aip09g01483 568 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 225 442 IPR044965 GO:0004553|GO:0005975
Aip09g01483 568 Gene3D Glycosidases 24 230 - -
Aip09g01483 568 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Aip09g01483 568 Gene3D - 341 440 - -
Aip09g01483 568 PRINTS Proline rich extensin signature 273 289 - -
Aip09g01483 568 PRINTS Proline rich extensin signature 300 312 - -
Aip09g01483 568 PRINTS Proline rich extensin signature 314 335 - -
Aip09g01483 568 PRINTS Proline rich extensin signature 435 460 - -
Aip09g01483 568 MobiDBLite consensus disorder prediction 425 459 - -
Aip09g01483 568 SMART X8_cls 343 427 IPR012946 -
Aip09g01483 568 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN SUPERFAMILY PROTEIN 225 442 - -
Aip09g01483 568 MobiDBLite consensus disorder prediction 483 543 - -
Aip09g01483 568 MobiDBLite consensus disorder prediction 260 303 - -
Aip09g01483 568 MobiDBLite consensus disorder prediction 425 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01483 Aip-Chr9 27398793 27402317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01483 77 430 Glycoside Hydrolase AT2G05790 29.073 1.60e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01483 - - adu:107465123 846.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g01483 09 27398793 27402317 Aip09g01483 09 27398793 27402317 ECH
Aip06g00842 06 11351885 11354200 Aip09g01483 09 27398793 27402317 PCT