Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00842 ATGGCCAAGGAAGCTTCTATCATCCTCTTGTTCCTCTCTTTTCTCCTTGTCTTCTGTTCAGGTACATTGGTGGGATTTTCTTTTGCTGAGAGTGAAGACACTGAATCACCCTCATTCATCCAGAAAACCAAGATCTACCACGTGAGTTTGGGGGGGTTTGTTCAATTTAGTGAAGGGATATCAAAATATCTTGAATCAGGAACCCAGATAGCTAGAAGAATAGTAGCATTATATGCAGAAAAATTGCAGATAACTGTTGATGGTTATGCTCAAAAGGAAGAGATCTTATTTCCTTTGTCTCAGAGAGAAAAAGAACTAAGCAAAGTTTATACAAGAAGAATTTTAGATGAGACAAATAACACACCTTCACCAGTTAATCCTACAAATCCAACTTCAGATACACCAGCCATAATCACAGTTCCTTCATCCACACCAGTTACAGTTTCACCCACCAATCCAACCACTTCAGTTCCTATAACAGTTCCCTCTTCCATACCTCCTCCCTCAACCCCCACAAATCCGGCGAATTCACCTGTACCTGTCACGAACCCTGCGGCTTCTTATCCGCCACCATCGGGGATTGTTCCTGTCATAAACAACCAGCCTCCTCCTGCAACAAGCACAAATGCTCCACCAGCAACTCAGGGTCAGGGTCAGGGTCAGGGTCAGAGCTGGTGTGTGGCAAAGAGTGGAGTCTCAGCAACTGCTCTTCAATCAGCACTTGACTATGCTTGTGGAATGCCTGGTGTAGATTGCTCACAGTTACAGCAAGGTGGGAGTTGTTACAATCCAAATTCTGTTCAAAATCATGCTTCTTTTGCGTTCAACAGCTATTACCAGAAGAATCCAGCACCAACAAGTTGTGACTTTGGAGGGACTGCTACCTTAGTCAACACCAACCCAAGCACAGGTTCTTGCATTTACCCATCATCGTCGTCGTCGTCATCATCTTTAACCGGAGCGGGTACATCAGGATCTGCTAGCTCACCATCAGGTTTGGGATTGCTAAGCCCTCCTGATGGAGATTCCTCACATTCAGCTGGTGTAAGACCTTTTCTCGGCTCCATGGTTCTGGCTATAACCTTGGTCACCAGAACACTCATTTTAAACCAATAG 1116 0.448 MAKEASIILLFLSFLLVFCSGTLVGFSFAESEDTESPSFIQKTKIYHVSLGGFVQFSEGISKYLESGTQIARRIVALYAEKLQITVDGYAQKEEILFPLSQREKELSKVYTRRILDETNNTPSPVNPTNPTSDTPAIITVPSSTPVTVSPTNPTTSVPITVPSSIPPPSTPTNPANSPVPVTNPAASYPPPSGIVPVINNQPPPATSTNAPPATQGQGQGQGQSWCVAKSGVSATALQSALDYACGMPGVDCSQLQQGGSCYNPNSVQNHASFAFNSYYQKNPAPTSCDFGGTATLVNTNPSTGSCIYPSSSSSSSSLTGAGTSGSASSPSGLGLLSPPDGDSSHSAGVRPFLGSMVLAITLVTRTLILNQ 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00842 371 MobiDBLite consensus disorder prediction 311 333 - -
Aip06g00842 371 MobiDBLite consensus disorder prediction 164 223 - -
Aip06g00842 371 Gene3D - 221 322 - -
Aip06g00842 371 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 43 326 IPR044965 GO:0004553|GO:0005975
Aip06g00842 371 MobiDBLite consensus disorder prediction 311 347 - -
Aip06g00842 371 MobiDBLite consensus disorder prediction 199 223 - -
Aip06g00842 371 SMART X8_cls 224 308 IPR012946 -
Aip06g00842 371 MobiDBLite consensus disorder prediction 164 198 - -
Aip06g00842 371 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 43 326 - -
Aip06g00842 371 Pfam X8 domain 225 295 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00842 Aip-Chr6 11351885 11354200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00842 204 310 Glycoside Hydrolase AT4G26830 43.750 3.97e-25 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00842 - - aip:107645980 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00842 06 11351885 11354200 Aip06g00842 06 11351885 11354200 ECH
Aip06g00842 06 11351885 11354200 Aip09g01483 09 27398793 27402317 PCT