Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01397 ATGGCATTATTCTCATTCTCATTCTCCTCATTCTGCCTCACAATTTTTGTCATCTATTCTTCTTTATCTCTATCTGCTGAATCACGTGTCTCACCAATTGCACCAATCTCTTCTCTCATTAGCAAAACCCTTTTCGACTCAATCTTTTTACATAAAGATGACAATGCTTGCCCTGCTAGAAACTTTTACACTTATGAATCCTTCGTTGAGGCAACCTCGAGCTTCCCAGCGTTCGGCTCGACCGGATGCTCGGCCACACGGAAGCGCGAGGTTGCCGCATTTCTTGCACAGATCTCACATGAAACCACAGGTGGTTGGGCTACTGCACCTGATGGACCATATGCTTGGGGGCTGTGCTTCAAGGAAGAAGTTAGTCCTCAAAGTGATTATTGTGATTCCTCCAACAAAGAATGGCCCTGTTATCCTGGAAAGAGTTACAAAGGCAGAGGACCAATTCAACTTTCCTGGAATTACAACTATGGGCCAGCAGGGAAGGCCTTGGGATTCGATGGCCTTAAGAACCCAGACATTGTGTCAAACAATTCAGTAATTGCATTCAAAACAGCACTCTGGTTTTGGATGACAGAGCAGAAACCAAAACCTTCTTGCCACAACGTCATGGTTGGGAATTACGTGCCAACAGCATCTGATAGAGCAGCAAATAGAACCTTAGGGTTTGGGTTGGTTACTAACATAATCAACGGTGGACTTGAATGTGGAGTTCCAGATGATGCAAGAGTCAATGATCGGATTGGATACTTTCAAAGATATGCTAAGTTGTTTAATGTAGATACTGGACCTAACTTGGATTGTGCATATCAGAAATCCTTCTAA 834 0.4365 MALFSFSFSSFCLTIFVIYSSLSLSAESRVSPIAPISSLISKTLFDSIFLHKDDNACPARNFYTYESFVEATSSFPAFGSTGCSATRKREVAAFLAQISHETTGGWATAPDGPYAWGLCFKEEVSPQSDYCDSSNKEWPCYPGKSYKGRGPIQLSWNYNYGPAGKALGFDGLKNPDIVSNNSVIAFKTALWFWMTEQKPKPSCHNVMVGNYVPTASDRAANRTLGFGLVTNIINGGLECGVPDDARVNDRIGYFQRYAKLFNVDTGPNLDCAYQKSF 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01397 277 SUPERFAMILY Lysozyme-like 36 277 IPR023346 -
Aip09g01397 277 ProSitePatterns Chitinases family 19 signature 2. 184 194 IPR000726 GO:0004568|GO:0006032|GO:0016998
Aip09g01397 277 PANTHER OS05G0138200 PROTEIN 10 277 - -
Aip09g01397 277 Pfam Chitinase class I 39 271 IPR000726 GO:0004568|GO:0006032|GO:0016998
Aip09g01397 277 Gene3D Endochitinase, domain 2 122 180 - -
Aip09g01397 277 ProSitePatterns Chitinases family 19 signature 1. 57 79 IPR000726 GO:0004568|GO:0006032|GO:0016998
Aip09g01397 277 PIRSF Endochitinase 9 277 IPR016283 GO:0004568|GO:0005975
Aip09g01397 277 CDD chitinase_GH19 40 271 - -
Aip09g01397 277 Gene3D - 43 277 - -
Aip09g01397 277 PANTHER CHITINASE-RELATED 10 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01397 Aip-Chr9 24596859 24599135 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01397 15 277 Glycoside Hydrolase AT4G01700 75.094 1.73e-153 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01397 - - gmx:100785397 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g01397 09 24596859 24599135 Aip09g01397 09 24596859 24599135 ECH
Aip06g00786 06 10436246 10437787 Aip09g01397 09 24596859 24599135 PCT